Rhodococcus sp. M8: ISO16_25470
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Entry
ISO16_25470 CDS
T11421
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ISO16_25470 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_25470 (recC)
Enzymes [BR:
rhmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ISO16_25470 (recC)
DNA repair and recombination proteins [BR:
rhmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ISO16_25470 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
MtrG
Motif
Other DBs
NCBI-ProteinID:
QPG45131
LinkDB
All DBs
Position
5580371..5583667
Genome browser
AA seq
1098 aa
AA seq
DB search
MLTLHRAERADTLAAALADLLAVPLADPFARELVAVPAKGVERWLTQRLSTVLGGTCGDG
VAANIDHPSPARLVDEALAAATGRAAEDDPWHPDRMLWTLLDVVDDCLDESWCTVLARHL
GRDGVDHRAGRRYATAAHLAGLFRSYSTQRPEMLVDWAAGRDTDGTGHGLADHLGWQARL
WRRLRERIGDDSPAERLTAACARLRAEPALVGWPSRLSLFGPTRLTVAQCAVLSAIAANR
DVHLWIPHPSPAMWEGQAAAEPVRRRADDRSALAVQHPLLASLARDVRELRAHLAGPGVA
DVHHAGRPGPDTLLGRLQDDLRADRPPARSAVADGTIRIHACHGPARQVEVLRECLLHLF
ADDPGLEPRDVVVMCPDVETYAPLVQAAFGQGALAQRDASGHPGHRLRVRLADRGLRRTN
PVLAVVSTLVDLADARVTASEVLDLAAAAPVRRRFGLVDDDLERLQEWTAAAGARWGIGK
GQRNAFGLGDFPQNTFGTALDRILLGAAADESQSEWLGLTLPLDDVESNDIDLTGRFAEY
IDRLTVALHGLRGPQPAAQWAAALARALDLLTDVEPADAWQLAQAHRELAAAVEHAGPAP
LRLADVRAMLAARLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLGLDDEVFPRAAHI
DGDDVLALNPCLGERDPRSEDRQLLLDAVMSAGETLLLFYTGADPVTGARRPPAIPLSEL
RDVVETMVGPEGMAEVVTRHPLQPFDPRNFRPGRPLSFDRAALAGARAAQHPARHRPGLL
HRPLAPVPRTDVDLADLVAFVTHPTQAFLRQRLGVRVPDRDEDIADALDIGLDPLARWDL
GDRMLEALLAGTDPADFRAAEWRRGTLPPYRLGELALDDVAGTVDALVAVCRPIYTGPAD
TVDVNVDLGDGRRLTGTVGGVHGTVVARSTFSRLAPKHRLTAWVHLLAVAVSDRPGQWQA
ITTGRGRFRSTPAWRSTINAPADALEQLARLVDLRDRGLHEPLPTATAAAAEYAERRHRG
DSVEMGVDAAAQEFGSTYGERTDRHIAYLYGSGVTLRDLTAVAARDDEQAWHGEPTRFGA
LARRLWEPLLSNEIQGRP
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacgctgcaccgcgccgagcgcgccgacaccctggcggccgccctcgccgacctg
ctcgccgtgcccctcgccgacccgttcgcccgcgagctcgtcgccgtccccgccaagggg
gtcgagcggtggctgacccagcggctgtcgacggtgctcgggggcacctgcggcgacggc
gtcgccgccaacatcgaccacccgtcgccggcacggttggtggacgaggcactggccgcc
gccaccggccgggcggcggaggacgacccgtggcatcccgaccggatgctgtggacgctg
ctcgacgtcgtcgacgactgcctcgacgaatcgtggtgcaccgtcctcgcccggcatctc
ggccgcgacggcgtcgatcaccgcgccggccgtcgctacgccaccgccgcccacctggcc
ggcctgttccgcagctactccacgcagcgcccggagatgctcgtcgactgggccgccgga
cgcgacacggacggcaccggccacggcctcgccgaccacctcgggtggcaggcacggctg
tggcggcggctgcgcgagcgcatcggcgacgacagtcccgccgagcggctcaccgccgcc
tgcgcgcggttgcgcgccgagcccgcgctcgtgggctggccgtcgcggctgtcgctgttc
ggacccacccggctcaccgtcgcccagtgcgccgtgctgtccgcgatcgccgcgaaccgc
gatgtgcacctgtggattccgcaccccagcccggccatgtgggaggggcaggcggccgcg
gagccggtgcgccggcgcgccgacgaccgcagcgccctcgcggtgcagcaccccctcctg
gcgagcctggcccgtgacgtgcgcgaactgcgcgcgcacctggccggccccggagtcgcc
gacgtgcaccacgccggccggcccggccccgacaccctcctcggccggctgcaggacgac
ctccgcgccgaccggcccccggcccgctccgcggtcgccgacggcacgatccgcatccac
gcctgtcacggcccggcccggcaggtcgaggtgctgcgcgagtgcctgctgcacctgttc
gcggacgatccgggtctcgaaccgcgcgacgtggtcgtcatgtgcccggacgtggagacc
tacgcgccgctcgtgcaggccgccttcggtcagggcgccctcgcccagcgcgacgcttcc
ggacaccccgggcaccggttgcgggtgcgtctggccgatcggggcctgcgccgcaccaac
ccggtgctggcggtcgtgtcgacgctcgtggacctcgccgacgcgcgggtgaccgccagc
gaggtcctcgacctcgccgccgccgcgccggtgcgccggcggttcggcctcgtcgacgac
gacctcgaacggctgcaggagtggaccgccgccgccggcgcccgatggggcatcggcaag
ggacagcgaaacgccttcgggctcggggacttcccgcagaacaccttcggcacggcactg
gaccggatcctgctcggtgcggccgccgacgagtcgcagagcgagtggctcgggctcacc
ctcccgctcgacgacgtcgagagcaacgacatcgacctgaccggacggttcgccgagtac
atcgaccggctgacggtggcgctgcacggcctgcgcggtccgcaaccggccgcgcagtgg
gccgccgccctcgcccgcgcactggacctgctgaccgacgtcgagcccgccgacgcctgg
cagctcgcccaggcgcaccgcgaactcgcggccgccgtcgagcacgccgggccggcgccg
ctgcggctcgccgacgtgcgggccatgctggcggcccggctcgcggggcggccgacgcgc
gcgaacttccgcaccggtgaactgaccgtgtgcacgatggtgccgatgcggtcggtgccg
caccgggtcgtggtcctgctcggcctcgacgacgaggtcttcccccgcgccgcgcacatc
gacggcgacgacgtgctggcattgaacccctgtctgggagaacgtgatccgcgcagcgag
gaccggcagttgctgctcgacgccgtcatgtcggcgggggaaacgctactgctgttctac
accggtgcggacccggtcaccggcgcccgccggcccccggcgatcccgctcagcgagctg
cgcgacgtggtcgagacgatggtcggacccgagggcatggccgaggtcgtcacccggcat
ccgctgcagccgttcgatccgcgcaacttccggcccggccgcccgctgagcttcgaccgg
gccgcactcgccggggcgcgcgccgcgcagcatccggcgaggcaccggcccgggctgctg
caccgtccgctcgcgcccgtcccgcgcaccgacgtcgatctcgccgacctcgtcgcgttc
gtcacccaccccacccaggcgttcctgcggcagcggctcggggtgcgggtgcccgaccgg
gacgaggacatcgcggacgccctcgacatcgggctcgacccgctcgcccggtgggacctc
ggcgaccgcatgctcgaggcgctgctcgccggcacggaccccgcggacttccgggccgcc
gaatggcggcgcgggacactgccgccgtaccggctcggcgagctcgcgctcgacgacgtc
gccggcaccgtggacgccctggtggcggtgtgccggccgatctacacgggaccggccgac
accgtcgacgtgaacgtcgacctcggcgacggccggcggctgaccggcacggtcggcggg
gtccacggcaccgtcgtcgcccgcagcaccttctcccggctggcgccgaagcaccgcctc
accgcctgggtgcacctgctcgccgtcgccgtgtcggaccggccggggcagtggcaggcg
atcaccaccggccgcggccggttccgcagcaccccggcctggcggtccacgatcaacgcc
cccgccgacgcgctcgagcagctcgcccggctcgtggacctgcgcgaccgcgggctgcac
gagccgctgccgacggccaccgccgccgccgcggagtacgccgagcggcgacaccgcggc
gactccgtcgagatgggcgtcgacgccgccgcccaggagttcggctccacctacggcgaa
cgcaccgaccggcacatcgcctacctgtacggctccggcgtgacgctgcgggacctgacc
gccgtcgccgcccgcgacgacgagcaggcgtggcacggcgagcccacccggttcggcgcc
ctcgcgcggcgcctgtgggagccgttgctgtccaacgagatccaggggcgtccgtga
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