Rhodococcus sp. M8: ISO16_27535
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Entry
ISO16_27535 CDS
T11421
Name
(GenBank) DEAD/DEAH box helicase
Organism
rhmm Rhodococcus sp. M8
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPG48417
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Position
6057087..6059900
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AA seq
937 aa
AA seq
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MVGMLHGLWSPGAGLMLWRDGDDPPDDTPAVLRRWIDRPFRHRVELRLPGDDGPRSIPAV
AVAPPDAAELLLALPRHAEGVAGDLRYLAHVARGLERWAQAGRVAPELHRADGQWWARWR
LLGGDRIRAWTAELSAAMPPVQRQAGRPAALLDDLATELTDPITRALIGNVGTSLHPLIA
ALAEGQPHHSGSQRMAEALDEWRASLAGNEPDLVLRLVEPDDEEDGIGADTLWRLEVCLR
SEGQAPVPVPVDGSDAQLLQIGIRKLGAALKAYPRLQDVPRDPDSLDLLLPTGVVTDLVE
HGGRALGEAGVALLLPRAWARLEPSLRLQVSSPVAPVAAEDDTVGMNALVSFEWQLAVGD
MLLTPAEMERLIAANSDLVKLRGKWVQADPIALARAARYVAGQGATDATLATLFGRFTGD
EPPPVEVTDVAATGWVATLLDGQVRPEPVPPPPGLHATLRPYQQRGLEWLAFMSGLGLGA
VLADDMGLGKTVQVLALLAHERAGGDDVPPTLLVCPMSVVGNWQREAQRFVPGLRVHVHH
GPARLRDAALAAAVADSDLVITTYALVARDVAPLRSLRWGRVVLDEAQHVKNAATAQSRA
TRAIPARHRVALTGTPVENRLEELRSILDFANPRLLGSPSTFRARFAVPIERERDAAAAA
RLRALTSPFVLRRVKTDPSVISDLPEKFEQTVRANLTAEQAALYRAVVDEMMRQIRDKEG
MARKGAVLAALTRLKQVCNHPAHYLGDGSGVLRRGRHRSGKLGLVEDIVESILADGEKAL
LFTQFREFGELIAPYLAERFDTTVPFLHGGVSKGRRDAMVAAFQGDGGPPMMLLSLKAGG
TGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQRRDVQVRKLVCVGTLEERIDEMIAG
KQELAELAVGAGENWITELSTEQLHSLLSLGDEAVGE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcatgctgcacgggctgtggtcaccgggagcgggcctgatgctgtggcgcgac
ggcgacgacccgcccgacgacacacccgctgtactgcgacgatggatcgaccggccgttc
cggcaccgggtcgagctgcgtctgcccggcgacgacggtccgcggtcgatcccggcggtg
gcggtcgcgccgcccgacgccgcggagctgctgctggcgctgccgcggcacgccgagggg
gtggccggggacctgcgctacctcgcccacgtcgcccgcggcctcgagcgctgggcgcag
gccgggcgggtggccccggaactgcaccgcgcggacgggcagtggtgggcccggtggcgc
ctgctcggcggtgaccggatccgtgcctggacggccgaactgtccgccgcgatgccgccg
gtgcagcggcaggccgggcggcccgcggcgctcctcgacgacctcgccaccgagctcacc
gatccgatcacccgggcgttgatcggcaacgtgggtacctcgctgcatccgctgatcgcc
gccctggccgaggggcaaccgcaccacagcggctcccagcgcatggccgaggcgctggac
gaatggcgggcctcgctcgcgggaaacgagcccgacctggtgctgcggctcgtcgaaccg
gacgacgaggaggacggcatcggcgccgacacgctgtggcggctcgaggtgtgcctgcgg
tcggaggggcaggcgccggtgccggtgccggtggacggctccgacgcccagctgctgcag
atcgggatccgcaagctcggcgccgccctgaaggcgtatccgcggctgcaggacgtgccg
cgcgacccggacagcctggacctgctgctgccgacgggggtcgtgaccgacctcgtggag
cacggtggccgcgcgctgggtgaggccggcgtcgcgttgctgctgccgcgcgcgtgggcg
cggctcgagccgtcgctgcggctgcaggtgtcctcgccggtcgcacccgtcgccgccgag
gacgacaccgtcggcatgaacgcgctcgtctcgttcgagtggcagcttgccgtgggcgac
atgctgctcacccccgccgagatggaacggctgatcgcggccaacagcgacctggtcaag
ctgcgcggcaagtgggtgcaggcggatccgatcgcgctcgcgcgggccgcccgctacgtc
gccggccagggcgcgacggacgcgacgctggcgacgttgttcggccggttcaccggcgac
gagccgccaccggtggaggtcaccgacgtcgccgcgaccggctgggtggcgaccctgctc
gacgggcaggtccggcccgaaccggtgccgcccccacccggcctgcacgcgaccttgcgt
ccgtaccagcagcgcggcctggagtggctggcgttcatgagcggcctcgggctgggcgcg
gtgctggccgacgacatgggcctcggcaagaccgtgcaggtgctcgcgctgctcgcccac
gaacgggcgggcggcgacgacgtgcccccgacgttgctggtgtgcccgatgtcggtggtg
ggcaactggcagcgcgaggcccagcggttcgtcccgggcctgcgcgtgcacgtccaccac
ggcccggcgcggttgcgcgacgccgcgctggccgcggcggtcgccgacagcgacctggtg
atcacgacgtacgcgctcgtcgcgcgtgacgtggcgccgttgaggtcgctgcgctggggc
cgggtggtgctcgacgaggcccagcacgtgaagaacgccgcgaccgcgcagtcccgcgcg
acgcgggcgatccccgcgcggcaccgcgtcgcgctcaccggcacccccgtggagaaccgg
ctcgaggaactgcgatcgatcctcgacttcgccaatccccgcctgttgggttcgccgtcg
acgttccgggcccggttcgccgtcccgatcgagcgggagcgcgacgcggccgccgccgcg
cggctgcgggcgttgacgtcgccgttcgtgcttcgccgcgtcaagaccgatccgtcggtg
atctcggacctgccggagaagttcgagcagacggtgcgggccaacctgaccgccgagcag
gcggcgctgtaccgggcggtggtcgacgagatgatgcggcagatccgggacaaggagggc
atggcccgcaagggcgcggtgctcgccgcgctgacccggctcaagcaggtgtgcaatcac
cccgcgcactacctgggcgacggctccggggtgctgcggcggggccggcaccgttcgggc
aagctcgggctggtggaggacatcgtcgagtcgatcctcgccgacggcgagaaggcgctg
ctgttcacccagttccgggagttcggtgagctgatcgccccgtatctcgccgagcggttc
gacaccacggtgccgtttctgcacggcggggtgtccaagggccggcgcgacgcgatggtc
gccgcgttccagggcgacggcggcccgccgatgatgctgctctcgctcaaggccggcggc
acgggcctgaacctgacggccgcgaatcacgtggtgcacctggatcgttggtggaatccg
gcggtggagaaccaggccaccgaccgggcgttccgcatcggccagcgccgcgacgtgcag
gtccgcaagctcgtgtgcgtcggcacgctggaggaacggatcgacgaaatgatcgcgggg
aaacaggaattggcggagcttgcggtgggagcgggcgagaactggatcaccgagctgtcc
accgagcagctgcactcgctgctgtccctgggcgacgaggcggtgggcgagtga
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