Rhizobium sp. N1341: AMJ98_CH00157
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Entry
AMJ98_CH00157 CDS
T04420
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03030
DNA replication
rhn03410
Base excision repair
rhn03420
Nucleotide excision repair
rhn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMJ98_CH00157 (polA)
03410 Base excision repair
AMJ98_CH00157 (polA)
03420 Nucleotide excision repair
AMJ98_CH00157 (polA)
03440 Homologous recombination
AMJ98_CH00157 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhn03032
]
AMJ98_CH00157 (polA)
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH00157 (polA)
Enzymes [BR:
rhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMJ98_CH00157 (polA)
DNA replication proteins [BR:
rhn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMJ98_CH00157 (polA)
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMJ98_CH00157 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMJ98_CH00157 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ANL07889
LinkDB
All DBs
Position
165728..168727
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVVFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAAGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVVEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
EMAKLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLVGFLKTMEFTSLTRRVAEVCDCDAS
AIEPAVVAIEWGKAAHGPDLDAAEPEPVAGGIPDVSGEAVPVPPRAKAKAGVEGAFSPAD
LAKARAEAFATLPFDHSTYETIRDLATLDRWIAAARDTGLIAFDTETTSLDAMQAELVGF
AMAIADNVADPTGTKIRAAYVPLAHKNGVGDLLGGGLAENQIPMRDALPRLKALLEDESV
LKVAQNLKYDYLLMKRYGVETKSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANITFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LAHMEARGITVDRQILSRLSGELAQGAARLEDEIYQLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQVTKLKSTYTDALPGYVHPQTRRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKMEPALAEAGLAERVRMLLQVHDELIFEVEDEDV
EKAMPVIVSVMENATMPALEMRVPLKVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttccggcttcatctttcgggccttt
cacgcattaccgccgctgacgcgcaaatcggacggcctgccggtcggcgccgtttccggt
ttctgcaacatgctgtggaagctcttgcgggatgcgcgcaacaccgatgtcggggtaacg
ccgacccatcttgccgtcgttttcgactattccgccaagacctttcgtaaggatctctat
gacgcctacaaggcgaaccgctcggccccgccggaagagctcatcccgcaattcggcctt
ataagagaggcgacccgcgccttcaacctcccctgcatcgagaccgaaggcttcgaggcc
gacgacatcatcgccacctatgcccgccaggccgaggcggcaggtgccgacgtcaccatc
gtctcctccgacaaggatctgatgcagctcgtcactcccaatgtccacatgtacgacagc
atgaaggacaaacagatcggcattcccgacgttgtcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattctgtcgacaacgttccaggcattccc
ggcatcggcccgaaaacggctgcccagctgctcgaggaatacggcgacctcgacacgctg
ctcgaacgcgccaccgagatcaagcaggtcaagcgtcgcgagacgatccttgccaatatc
gaaatggccaagctctcgcgcgacctcgtccgcctgcgcaccgacgtgccgctcgatctc
gatctcgacgcgctggtgctggaaccgcagaacggcccgaagctcgtcggcttcctgaag
acgatggaattcacatcgctgacccgacgcgtcgccgaagtctgcgattgcgatgcgagc
gccatcgaaccggcggtcgtcgctatcgaatggggcaaggcggcccatggtcccgatctg
gacgcggccgagcccgaacccgtcgccggcggcatcccggacgtttcgggcgaagcggtg
cccgtgccgccgcgcgcgaaggcgaaggccggcgtcgaaggcgctttttcgccggccgat
cttgccaaggcgcgggccgaggcttttgcgacgctgcccttcgatcactcgacctatgaa
acgatccgcgatctggcgacgctcgaccgctggattgccgctgcgcgcgacacagggctc
atcgctttcgatacggagaccacgtcactggatgcgatgcaggccgagcttgtcggcttt
gcgatggcgatcgccgacaatgtcgccgatcccaccggcacgaagatccgtgccgcctat
gtgccgctcgcccataagaacggcgtcggcgatctgctcggcggcggccttgctgaaaac
cagatccccatgcgcgatgccttgccgcggctgaaggcattgctggaggacgaatcggtt
ctcaaggtcgcccagaacctgaaatacgactacctcttgatgaagcgctacggcgtcgag
acgaagagtttcgacgacacgatgctgatctcctacgtgctcgacgccggcaccggcgcg
cacggcatggacccgctctcggaaaaattcctcggccacacgccgatcccctataaggat
gtggcgggcagcggcaaagcgaacatcaccttcgatctcgtcgacatcgatcgcgccacc
cattatgccgccgaagacgccgatgtgacgctgcgcctctggctcgtgctgaagccgcgg
ctggcggcggcggggctgaccagcgtctacgagcggctggagcggccgctgctgccggtg
ctggcgcatatggaagcgcgcggcatcaccgtcgacaggcagatcctgtcgcggctgtcc
ggcgaactggcgcagggtgcggcgcgcctggaagacgagatctaccagctcgccggcgag
cgtttcaacatcggttcgccgaagcagctgggcgacatcctgttcggcaagatgggcctt
gccggcggcagcaagacgaagaccggacaatggtcgacctccgcctcggtgctcgaggat
ctcgccgcagccggtttcgagctgccgcgcaagatcgtcgactggcgccaagtcaccaag
ctgaaatccacctataccgacgcgcttccgggctatgtccatccgcagaccaggcgggtc
cacacctcctattcgctggcttcgacgaccacggggcgcctgtcctcgtccgagccgaac
ctgcagaatattccggtgcgcaccgcagaaggccgcaagatccgcaccgccttcatctcg
acgccgggtcacaagctgatctccgccgactacagccagatcgaactgcgggtgcttgcc
catgtggccgagatcccgcagctgaccaaggccttcgaggacggcgtcgacattcacgcc
atgaccgcgtcggaaatgttcggcgtgccggtcgaaggcatgccgggcgaggtgcgccgc
cgggccaaggcgatcaatttcggcatcatctacggcatctccgccttcggcctcgccaac
cagctttcgatcgagcgttcggaagccggcgactacatcaagaaatatttcgaacgcttc
ccggggatccgcgactatatggagagccgcaaggcgatggcccgcgacaagggttatgtc
gaaacgatcttcggccgccgcatcaactatccggaaatccgctcctccaacccttcggtg
cgcgccttcaacgaacgggcggcgatcaacgcgccgatccagggctctgcggccgacgtc
atccgccgggcgatgatcaagatggagccggcgctcgccgaagccggtcttgccgagcgc
gtgcgcatgctgctgcaggtgcatgacgagctgattttcgaggtcgaggacgaggacgtc
gaaaaggcgatgccggtcatcgtctcggtcatggaaaacgctacgatgccggcgctcgaa
atgcgcgtgccgctcaaggtcgatgcccgcgccgccaccaattgggacgaggcgcattaa
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