Rhizobium sp. N1341: AMJ98_CH00347
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Entry
AMJ98_CH00347 CDS
T04420
Name
(GenBank) protease secretion system ABC transporter ATP-binding protein PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMJ98_CH00347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhn02000
]
AMJ98_CH00347
02044 Secretion system [BR:
rhn02044
]
AMJ98_CH00347
Transporters [BR:
rhn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
AMJ98_CH00347
Secretion system [BR:
rhn02044
]
Type I secretion system
Multiple protein transporter
AMJ98_CH00347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_25
AAA
AAA_16
NACHT
RsgA_GTPase
AAA_30
Zeta_toxin
AAA_22
nSTAND3
AAA_29
TsaE
Motif
Other DBs
NCBI-ProteinID:
ANL08076
LinkDB
All DBs
Position
complement(344518..346263)
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AA seq
581 aa
AA seq
DB search
MKTKQPPPALQVVMKEARRAIRPLIWFSGGINVLMLTGALYMLQVYHRVLSSHSLETLAM
LSLMAAGALAAMAGLEVVRGRLLATVGSWMNARLAPVLLTASVEYAASKPGQANARPLRD
LDQVRNFFTSPSIFPILDAPWAPLFFAAIFFMHPWLGWLALSGGGVLFALALLNEWLTRK
PLTEATSAQSRAYNQAEAAIRNAEVVQAMGMLKPLLEGWKVQQDEANRGQVLAANRGGII
SAIARCHRLALQMGILGLGAYLVLRNEASPGIMVSASILMGRALSPVEQAIGTWKATVGA
RAAYRRLTAVAGEHPESTPVPAMPRPTGRFEADNIVLARQGGEHILKGINFRLEPGESMA
LIGQSGAGKTSLARILAGAWRPSGGRALLDGMDVAQWAAEDRGHHVGYLPQDIELFAGNV
CENICRFATVSPVVFDKAVKAAQLAGVHELIKGLPKGYLTEIGESGAVLSGGQRQRIGLA
RALYGDPALIILDEPNSNLDREGEEALIAALGTVKAAGTTVILIAHRPNIMETVDKILVL
NRGQQDLFGPRDHVFNELAARVRKVAQMPTIVAKQQGPKQP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaacagccgcccccggcgcttcaggtggtgatgaaagaggccagacgggcc
attcggccgcttatctggttcagcggcggcatcaacgtcctgatgctgaccggggcgctt
tacatgctgcaggtctatcaccgcgtgctgtccagccacagtctcgagaccttggcgatg
ttatcgctgatggccgcaggcgcacttgcggcaatggcggggctggaggtggtgcgcggg
cgccttctggcaaccgtggggtcgtggatgaacgcgcggctggcgcccgttctgctgacg
gcatcggtggaatatgccgcctcaaaacccggccaggccaatgcccgcccactgcgcgac
ctcgatcaggtccggaatttcttcaccagtccgagcatcttcccgattctcgatgcgcct
tgggcgccgctgtttttcgccgccatcttcttcatgcatccctggctgggctggctggcg
ctgtcgggcggcggggtgctgtttgcactggccttgctcaacgaatggctgacgcgcaag
ccgttgaccgaggccaccagcgcacagtcgcgggcctacaaccaggccgaggcggcaatc
cgcaacgccgaggtcgtccaggcgatgggcatgctgaagccgctgctggaaggctggaag
gtgcagcaggacgaggcaaacaggggccaggttctcgccgccaaccgcggcggcatcatc
tcggccattgcgcgttgccaccggctggctctgcaaatgggaatattgggcctcggagcc
tatctcgtcctgcgcaacgaggcttccccgggcatcatggtctccgcctccatcctgatg
ggccgcgcgctatcgccggtcgagcaggcgatcggcacgtggaaggcgacggtcggcgcg
cgcgccgcctaccggcgcctcaccgccgtcgccggcgagcacccagagtccacgccggtt
ccggcaatgccgcggccgacaggccggttcgaggcagacaatatcgtgcttgcccgacag
ggcggcgaacatattctgaaagggatcaacttccgtctcgagccgggtgaatccatggcg
ttgatcggccagagcggggccggcaagacgagcctggcacgcatcctggccggggcctgg
cgcccttccggcgggcgggctttgctcgatggcatggatgtcgcccaatgggcggcggag
gaccgcggtcatcatgtcggctacctgccgcaggacatcgagcttttcgcaggcaatgtc
tgcgaaaatatctgccgcttcgccacggtcagtcccgtggtgttcgacaaggcggtcaag
gcagcgcagctcgccggcgtccacgaactgatcaaagggctgccgaagggttacttgacc
gagatcggtgaatccggcgcggtgctgtcgggcggacagcgccagcgcatcggcctggcg
cgggcgctctacggcgatccggcgctcatcatcctggacgagcccaattcgaatctcgac
cgggagggcgaggaggccttgatcgcggcgctcggcacggtcaaggcggcgggcacgacc
gttatcctgatcgcacaccggccgaacatcatggaaaccgtcgacaagatactggttctc
aaccgaggccagcaggacctgttcggtccgcgcgaccatgtcttcaatgaactcgccgca
cgtgtccgcaaggtcgcccagatgccgacgatcgtggcaaagcagcaaggaccgaaacag
ccatga
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