Rhizobium sp. N1341: AMJ98_CH00494
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Entry
AMJ98_CH00494 CDS
T04420
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00061
Fatty acid biosynthesis
rhn00071
Fatty acid degradation
rhn01100
Metabolic pathways
rhn01212
Fatty acid metabolism
rhn02024
Quorum sensing
rhn04146
Peroxisome
Module
rhn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMJ98_CH00494 (fadD)
00071 Fatty acid degradation
AMJ98_CH00494 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AMJ98_CH00494 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMJ98_CH00494 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhn01004
]
AMJ98_CH00494 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhn04147
]
AMJ98_CH00494 (fadD)
Enzymes [BR:
rhn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AMJ98_CH00494 (fadD)
Lipid biosynthesis proteins [BR:
rhn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AMJ98_CH00494 (fadD)
Exosome [BR:
rhn04147
]
Exosomal proteins
Exosomal proteins of breast milk
AMJ98_CH00494 (fadD)
Exosomal proteins of breast cancer cells
AMJ98_CH00494 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANL08220
LinkDB
All DBs
Position
complement(495707..497407)
Genome browser
AA seq
566 aa
AA seq
DB search
MSSISVHPNGAKADKPWLATYPEMVPAELPPLEHASLAELLEKSCARYADRTVFSSMGKA
MSYRELEDQTRKVAAWLQSIGLEKGDRVAVMMPNVLQNPVATYAILRAGFVVVNVNPLYT
PRELEHQLRDSGAKAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGPKGLIVNLVVRK
VKKLVPSWSIPQHKSFSQVLREGAKKSLQPVTLAGGDVAFLQYTGGTTGVAKGAVLTHQN
LLANKLQLSLWLRSAFERKKQPEVLNFLCALPLYHIFALTVNSLMGMSLGAHNILIANPR
DIPGLVKEFEKSDVHIFPGLNTLFNALMNNAEFAKLDFSSLIMSLGGGMAVQRPVAERWL
KMTGTAITEGYGLSETSPVATANRFDSIEFTGSIGLPLPSTELDIRDEEGRPLPLGEIGE
ICIRGPQVMAGYWQKPEETARVMTADGYFRSGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
RPRFIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatttccgtccatccgaacggagcaaaagccgacaagccctggcttgccacc
tatcccgaaatggttccggccgaactcccgccgctggaacatgcctctcttgccgaactc
ctggaaaagtcctgcgcccgttacgccgaccggacggttttttccagcatgggcaaggcg
atgagctaccgcgagctggaggaccagacgcgcaaggtcgccgcctggctgcagagcatc
gggctcgagaagggcgaccgcgtcgcggtgatgatgccgaacgtcctgcagaatccggtc
gcgacctatgccatcctcagagccggcttcgtcgtcgtcaacgtcaatccgctctatacg
ccgcgtgagctcgaacaccagctgcgcgattccggcgccaaagcgatcttcgtgttggag
aattttgcccgcacggtcgagcaggtcctgaacaagaccgatctgcgccacgtcgtcgtc
acctcgctcggcgagatgctggggccgaaggggctgatcgtcaatttggtcgtgcgcaag
gtgaagaagctcgttccttcctggtcgatcccgcagcataagagcttcagccaggtgctg
cgcgaaggcgcgaagaaaagccttcagccggtgacgctagccggcggcgacgtcgccttc
ctgcaatataccggcggcacaacaggcgttgccaagggtgcggtgctgacgcatcaaaat
ctgctcgccaacaagctgcagctgtcactctggctgcgatcggccttcgagcgcaagaaa
cagcccgaagtgctgaatttcctctgcgcgctgccgctctaccacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgctcggcgcccacaatatcctgatcgccaatccgcgc
gacattcccgggctggtcaaggaattcgaaaagtccgatgtgcatatcttcccgggcctc
aacacgctgttcaacgcactgatgaacaatgccgaattcgccaagctcgacttctcctcg
ctgatcatgtcgctcggcggcggcatggccgtccagcgcccggtcgccgaacgctggttg
aagatgaccggcacggcaattaccgagggttacggcctttccgagacctcgcccgtcgcc
accgccaaccgcttcgattccatcgagttcaccggttcgattggcctgccgctgccctcc
accgaactcgacatccgcgacgaggagggccggccgctgccgctcggcgaaatcggcgag
atctgcatccgcggaccgcaggtgatggccggctattggcagaagccggaggaaacggcg
cgggtgatgaccgcggacggctatttccgctccggcgacatgggcttcatggacgaacgc
ggctacaccaagatcgtcgaccgcaagaaggacatgatcctggtttcgggcttcaacgtc
tatccgaacgagatcgaggaagtcgccgccatgcatgccggcattctcgaagccgcggcg
atcggcgtgccggacgggcattcgggcgaagcagtcaaactcttcgtcgtcaggaaggat
ccgaacctgacggaggcggaggtgaaggcccattgcatcgccaatctcaccaattacaaa
cgcccgcgcttcatcgaattccgcaccgaactgccgaaatcccccgtcggcaagatcctg
cgcaaggacctgcgcggctga
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