Rhizobium sp. N1341: AMJ98_CH00652
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Entry
AMJ98_CH00652 CDS
T04420
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AMJ98_CH00652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH00652
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AMJ98_CH00652
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GFIT
Motif
Pfam:
Ku
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
ANL08373
LinkDB
All DBs
Position
complement(655711..656544)
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AA seq
277 aa
AA seq
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MAARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFVDSETGKPVGR
DDQVKGYRMENGDYIVIEGDEIAEITPESDKVLNVKAFIAYDDIDKLYFDRPYYLAPVDE
HDEEALSLIVRGMRDSKVAALAEAVLFQRNRTLLIRPHDGHMVATMLNFDYEVRSAEAVF
RDIPDIKFDKEMLELAGHIIETKHGSFDPSAYEDRYEAALVELVKAKIEGRAPPKKKPAP
ESKVIDLMEALRQSAKMSGKAAKKTPARSDSQSKKAG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcaagctggaaaggtcatctgaaggtaggcgaccttgcttgcgccgtc
gggctctataccgccatttcttcctccgaccgcgtttccttcaacatcatcaaccgcagg
accggccaccgggtggaacggcaattcgtcgacagcgagaccggcaagccggtcgggcgg
gacgatcaggtgaagggctaccggatggagaatggcgattacatcgtcatcgaaggcgac
gagatcgccgagatcacgccggaaagcgacaaggtgctcaacgtcaaggctttcattgcc
tatgacgatatcgacaagctctatttcgaccggccctattacctcgcgcccgtcgacgaa
catgatgaagaagcgctgtcgttgatcgtccgcggcatgcgcgacagcaaggtcgcggcg
ctcgccgaagccgtgcttttccagcgcaaccgaacgctgctgatccggcctcatgacggc
cacatggtcgcgaccatgctgaatttcgactatgaggtgcgctcagccgaggcggtcttc
agagacattcccgacatcaagttcgacaaggagatgctcgagctcgccgggcacatcatc
gagaccaagcacgggagcttcgatccgagcgcctacgaggaccgttacgaagcggccctc
gtcgaactagtgaaggcaaagatcgagggccgggcgccgccgaagaagaaaccggcgccc
gaaagcaaggtcatcgacctgatggaggcgctgcgccagagcgccaagatgagcggcaag
gcggcgaagaagacgccggcgcgcagcgacagccaaagcaaaaaggcaggctga
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