Rhizobium sp. N1341: AMJ98_CH00805
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Entry
AMJ98_CH00805 CDS
T04420
Symbol
rfbB
Name
(GenBank) dTDP-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00521
Streptomycin biosynthesis
rhn00523
Polyketide sugar unit biosynthesis
rhn00525
Acarbose and validamycin biosynthesis
rhn00541
Biosynthesis of various nucleotide sugars
rhn01100
Metabolic pathways
rhn01110
Biosynthesis of secondary metabolites
rhn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AMJ98_CH00805 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AMJ98_CH00805 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AMJ98_CH00805 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AMJ98_CH00805 (rfbB)
00525 Acarbose and validamycin biosynthesis
AMJ98_CH00805 (rfbB)
Enzymes [BR:
rhn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AMJ98_CH00805 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
ANL08523
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Position
complement(813300..814400)
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AA seq
366 aa
AA seq
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MRLELSIYQMSKGKNMILVTGGAGFIGANFVLDWLALHDEPVVNLDALTYAGNLENLNSI
WSDPRHVFVKGSIADYDLVDALLRAHQPRAILNFAAESHVDRSIHGPEEFIQTNIVGTFR
LLEAIRGFLASQNEDFRESFRFLHVSTDEVYGSLAPDEAAFSEHRKYEPNSPYSASKAAS
DHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIHNALSGKQIPIYGDGMQVRDWL
FVKDHCSAIRRVLERGKVGETYNVGGRNELTNLSVVNTLCEILDELRPLPNGASYKAQIS
FVRDRPGHDRRYAIDAAKIERDLDWRPSETFETGIRKTVEWYLANDAWVENVTSGSYRQW
INRQYQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagactagagctttccatttatcagatgtccaaagggaaaaacatgatcttggtgacg
ggaggcgccggctttatcggtgcgaatttcgtgctcgactggcttgcgcttcacgatgag
ccggtcgtcaacctcgatgccctcacctatgccggcaatcttgagaacctcaactccatc
tggagtgatccgcgtcatgtcttcgtcaagggcagcattgcggattacgaccttgtcgac
gcactgctccgtgcccatcagcctcgcgccattctgaatttcgctgccgaaagtcatgtc
gatcgatcgatccatgggccagaagaatttatccagaccaatattgtcggcacgtttcgt
ctgctggaggcaatccggggatttcttgcctcacagaatgaagacttccgggaaagcttt
cgcttccttcacgtatcgacggacgaagtctatggttcgcttgctcccgacgaggccgct
ttcagcgaacatcgcaaatacgaacccaatagtccttattccgcgagcaaggcagcaagc
gaccatctggttcgcgcctatcatcacacctatggcctacccgttctgacgacgaactgt
tcgaacaattacggtccctatcattttcccgagaagcttattccgctcgttattcacaat
gccctctcggggaaacagattccgatctacggagacgggatgcaggtgcgcgactggctg
ttcgtcaaagatcattgcagcgccattcgacgtgttctggaaagaggaaaagtcggggaa
acctacaatgtcggcggcaggaatgagctgacgaacctgtcggtcgtcaatacgctctgc
gaaattctcgacgaattgaggcccctgccaaacggggcgagctacaaggcccagatttcc
tttgtgcgtgatcggccaggtcatgatcgccgttacgccatcgatgcggccaagatagaa
agggacctggactggcgccctagtgagaccttcgagacaggcattcgcaagaccgtcgaa
tggtatctcgccaacgatgcttgggtagagaacgtcacaagcggcagctatcgacagtgg
atcaaccggcagtaccaataa
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