Rhizobium sp. N1341: AMJ98_CH00847
Help
Entry
AMJ98_CH00847 CDS
T04420
Symbol
groEL-1
Name
(GenBank) chaperonin GroEL 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMJ98_CH00847 (groEL-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhn03019
]
AMJ98_CH00847 (groEL-1)
03110 Chaperones and folding catalysts [BR:
rhn03110
]
AMJ98_CH00847 (groEL-1)
03029 Mitochondrial biogenesis [BR:
rhn03029
]
AMJ98_CH00847 (groEL-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhn04147
]
AMJ98_CH00847 (groEL-1)
Enzymes [BR:
rhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AMJ98_CH00847 (groEL-1)
Messenger RNA biogenesis [BR:
rhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AMJ98_CH00847 (groEL-1)
Chaperones and folding catalysts [BR:
rhn03110
]
Heat shock proteins
HSP60 / Chaperonin
AMJ98_CH00847 (groEL-1)
Mitochondrial biogenesis [BR:
rhn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AMJ98_CH00847 (groEL-1)
Exosome [BR:
rhn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AMJ98_CH00847 (groEL-1)
Exosomal proteins of other body fluids (saliva and urine)
AMJ98_CH00847 (groEL-1)
Exosomal proteins of breast cancer cells
AMJ98_CH00847 (groEL-1)
Exosomal proteins of colorectal cancer cells
AMJ98_CH00847 (groEL-1)
Exosomal proteins of bladder cancer cells
AMJ98_CH00847 (groEL-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ANL08564
LinkDB
All DBs
Position
complement(854363..856000)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQVGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDVFILLHEKKLSNLQSMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITSKGVNDDQEAGINIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNYGYNA
QTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGGMGGMG
GMDMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaaatcaagtttggccgcaccgcgcgcgaaaagatgctgcgcggcgtc
gacattctcgccgacgcagtcaaggtcacgctcggcccgaagggtcgtaacgtcattatc
gacaagtccttcggcgcgccgcgcatcactaaggacggcgtttcggtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacatcgccggcgacggcacgaccactgcaaccgttcttgcccaggcgatcgtt
cgcgaaggcgcgaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgtcgccgaagtcgtcaaggatctccaggccaaggccaagaagatcaacacc
tcggaagaagtcgctcaggtcggcacgatctccgcaaacggcgagcgccaggttggcctc
gacattgctgaagccatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgagaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctc
agcccctacttcgtcaccaacccggaaaagatggtcgccgacctcgaagacgtcttcatt
ctcctccacgaaaagaagctctcgaacctgcagtcgatgctcccggttctcgaagccgtc
gtccagaccggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagcccttgca
acgctcgtcgtcaacaagctgcgcggcggcctgaagatcgctgccgtcaaggcccctggc
ttcggcgatcgccgcaaggccatgctcgaagacatcgccatcctgaccggcggcaccgtg
atctccgaagacctcggcatcaagctcgagagcgtcacgctcgacatgctcggccgtgcc
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggttcgggcgccaagtcc
gacatcgaaggccgtgttgcccagatcaaggcccagatcgaagaaaccacctccgactac
gaccgcgaaaagctgcaggaacgccttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggttcgaccgaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgccctc
aacgcgacgcgcgctgccgttcaggaaggcatcgtaccgggcggcggcgttgccctgctg
cgttcttccgtcaagatcacctccaagggtgtcaacgacgaccaggaagccggcatcaac
atcgttcgccgcgctctgcaggctccggcccgccagatcgccgagaatgctggtgacgaa
gcttcgatcgtcgtcggcaagatcctcgacaaggatcaggacaactacggctacaacgcc
cagaccggcgaatatggcgacatgatcggcatgggcatcatcgacccggtcaaggtcgtt
cgcaccgccctgcaggacgcggcttccgtcgcatcgctgctgatcaccaccgaagccatg
atcgccgagctgccgaagaaggacgctccggctatgccgggcggcatgggcggcatgggt
ggaatggacatgatgtga
DBGET
integrated database retrieval system
