Rhizobium sp. N1341: AMJ98_CH01158
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Entry
AMJ98_CH01158 CDS
T04420
Name
(GenBank) LacI family transcriptional regulator protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhn03000
]
AMJ98_CH01158
Transcription factors [BR:
rhn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AMJ98_CH01158
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_10
HTH_3
HTH_23
UBA_7
Motif
Other DBs
NCBI-ProteinID:
ANL08873
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Position
1167656..1168693
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AA seq
345 aa
AA seq
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MKNSVERGRKAKRGMQVKLSDVAKKVGVSPITISRALRNPEIVSEDLREEILRTVEEMGY
IPNLAARALAGRHNGIIGVITPALHQYGFAGLMIGIEDRFRGTEFTVQYSSTLHHAEGEA
GLLKSILTQKPAGVIIAGAESYCNLLPLIENAACPIAHVTDLSQEPQRLVVGLDHYAAGA
EPTRFLLSRGYSRIAFIGRGADVRSRRRIEGYEAVMREAGLFQEDLIIGGDAPSRIGLGR
ELFSRLLERVPDVDAVFAQSDELAFGVLIECKARGIRVPEDVGICGFNDLEFSPFIEPSL
TTVHLPRQDIGHRVADMLLRAIHDEPPGDDRVDCGFSIVARGSTR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactcggttgagcgggggcggaaagccaaacgcgggatgcaggtgaagctgagc
gatgtggcgaagaaggtgggcgtcagcccgatcaccatttcgcgtgcgttgcgcaatccg
gaaatcgtctcggaggatctgcgcgaggagattctgcgcacggtcgaggagatgggctat
attcccaatcttgccgcccgggcgctggccggccgccacaacggcattatcggcgtcatc
acgcccgccctgcatcagtacggttttgccggcctgatgatcggcatcgaggatcgcttc
cgcggcaccgagttcactgtgcaatattccagcacgctgcaccatgccgagggcgaggcc
ggcctgctgaaatccatcctgacccagaagccggccggcgtcatcatcgccggcgccgaa
tcctattgcaatcttctgccgctgatcgagaacgccgcctgtcccatcgcccatgtcacc
gatctcagccaggaaccgcaaaggctggtcgtcggcctcgatcattatgcggccggcgcc
gagccgacccgctttctgttgtcgaggggctatagtcggatcgccttcatcggccgcggc
gcggatgtccgctcgcgccggcgcatcgaggggtatgaggcagtaatgcgggaagccggc
cttttccaagaggatctcatcatcggcggcgatgcgccgagccgtatcggcctcggcagg
gagttgttctcccgcctgctcgagcgcgtgcccgatgtcgatgccgtttttgcccagagc
gatgaactggccttcggcgtgctgatcgaatgcaaggcgcgcggcatccgcgtgccggag
gatgtcggcatctgcggcttcaacgacctggaattttcgcccttcatcgagccgtcgctg
acgacggtgcacctaccgcgccaggatatcggccaccgcgtcgccgacatgctgctgcgc
gccatccacgacgagccgcccggggacgacagggtcgattgcggcttttcaatcgtggcg
cgggggtcgacgcggtga
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