Rhizobium sp. N1341: AMJ98_CH01620
Help
Entry
AMJ98_CH01620 CDS
T04420
Name
(GenBank) DNA-binding HU-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhn03032
]
AMJ98_CH01620
03036 Chromosome and associated proteins [BR:
rhn03036
]
AMJ98_CH01620
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH01620
DNA replication proteins [BR:
rhn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMJ98_CH01620
Chromosome and associated proteins [BR:
rhn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AMJ98_CH01620
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AMJ98_CH01620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ANL09324
LinkDB
All DBs
Position
1646289..1646564
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKSDAASAVDAVFDVVQAELKNKGDIRLAGFGSFTVSHRAATKG
RNPSTGAEVDIPARNVPKFTPGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactcgtgtccgcagtcgccgaaaaggcaggactgacgaagtctgac
gcggcttccgctgttgacgcggttttcgacgttgtccaggccgaactcaagaacaagggc
gacatccgcctcgctggtttcggcagcttcaccgtttctcatcgcgctgcaacgaagggc
cgtaacccgtcgaccggcgctgaagtcgatatcccggctcgcaacgtgccgaagttcacg
cccggcaagggcttgaaggacgccgtcaacggctga
DBGET
integrated database retrieval system
