Rhizobium sp. N1341: AMJ98_CH01738
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Entry
AMJ98_CH01738 CDS
T04420
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMJ98_CH01738 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhn03021
]
AMJ98_CH01738 (rpoA)
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH01738 (rpoA)
Enzymes [BR:
rhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMJ98_CH01738 (rpoA)
Transcription machinery [BR:
rhn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMJ98_CH01738 (rpoA)
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMJ98_CH01738 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
ANL09424
LinkDB
All DBs
Position
1750179..1751189
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSSRTRATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLNMTIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaactgatcaagccgaacaaggtggagttctcctcgagc
tcgcgcaccagggcgacgcttgtcgccgaaccgctggagcgcggcttcggcctcaccctc
ggcaacgcgctgcgccgcgttctgctctcctcgctgcgcggtgctgccgtcacggcggtg
cagatcgacggcgtgctgcacgaattctcctcgattcccggcgtccgcgaagacgtcacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcgaagcgc
atggtcgtccgtaagcagggcccgggcgttgtcacggctggcgacattcagacggtcggc
gatatcgaaatcctcaaccccgagcatgtgatctgcacgctcgacgagggcgccgaaatc
cgcatggaattcaccgtcaacaacggcaagggctatgttccggccgaacgcaatcgtgca
gaagatgctccgatcggccttatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgcgaaggacaggttctcgactacgacaagctgaacatg
accatcgaaaccgatggctcgatcaccggcgaagacgccgtcgctttcgcggcgcgcatc
ctccaggatcagcttggcgtcttcgtcaacttcgacgagccgcagaaggaaaccgaagaa
gaagcagtcaccgaactcgctttcaacccggctctcctcaagaaggtggacgaactcgaa
ctgtcggtccgttcggcaaactgcctgaagaacgacaacatcgtctacattggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgttacgaagaccagtactga
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