Rhizobium sp. N1341: AMJ98_CH01771
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Entry
AMJ98_CH01771 CDS
T04420
Name
(GenBank) exodeoxyribonuclease III xth protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMJ98_CH01771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH01771
Enzymes [BR:
rhn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AMJ98_CH01771
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AMJ98_CH01771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
ANL09457
LinkDB
All DBs
Position
complement(1784700..1785491)
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AA seq
263 aa
AA seq
DB search
MKIASYNVNGINGRLTNLLRWLKEDAPDVACLQELKTDDARFPRKEIERAGYGAVWHGQR
SWNGVAILAKDKTPILTRRGLPGDPDDTHSRYIEAVIEGMLIGCLYLPNGNPFPSAKFEY
KLRWFGRLHAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWRDDALFRPEVRDAYARL
VSQGWTDAIRHLHPNERIYTFWKYWRNSFERDAGLRIDHFLLSPTVAPWLRSATVRRKPR
SWEHTSDHAPVMIELDLPAAEAV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcatcctacaatgtgaacgggatcaacgggagactgaccaacctgctgcgc
tggctgaaagaggatgcccccgatgtagcctgccttcaggaactgaaaaccgacgacgcc
aggtttccgcgaaaagagatcgagcgggccggctacggcgccgtctggcacgggcagcga
tcctggaacggcgtcgccatcctggcaaaggacaagacaccgatcctgacgcggcgcggt
cttcccggcgatcctgacgacacccacagccgatatatcgaagccgtcatcgaaggaatg
ctgatcggatgcctgtatctgccgaacggcaacccttttcccagcgccaagttcgaatac
aagcttcgctggttcgggcgcttgcacgcctatgccgccgaactgctcgaaatcgaggtg
ccttccatccttgccggcgatttcaatgtcatgccgacggagatcgacgtctacaagccg
gagcgctggcgagacgatgcacttttcaggcccgaagtccgcgacgcctacgcccggctc
gtctcccagggctggacggatgccatccggcatctgcatccgaacgagcgcatctacacc
ttctggaaatattggcggaacagtttcgagcgcgacgccgggcttcggatcgaccacttt
ctgctcagcccgacagtggcgccgtggctccgatcggcaaccgtccggcgcaagccccgg
agttgggagcatacgagcgaccacgcacccgtcatgatcgagctcgatcttccggcagct
gaagccgtgtga
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