KEGG   Rhizobium sp. N1341: AMJ98_CH02001
Entry
AMJ98_CH02001     CDS       T04420                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn00010  Glycolysis / Gluconeogenesis
rhn00020  Citrate cycle (TCA cycle)
rhn00260  Glycine, serine and threonine metabolism
rhn00280  Valine, leucine and isoleucine degradation
rhn00310  Lysine degradation
rhn00380  Tryptophan metabolism
rhn00620  Pyruvate metabolism
rhn00630  Glyoxylate and dicarboxylate metabolism
rhn00640  Propanoate metabolism
rhn00670  One carbon pool by folate
rhn00785  Lipoic acid metabolism
rhn01100  Metabolic pathways
rhn01110  Biosynthesis of secondary metabolites
rhn01120  Microbial metabolism in diverse environments
rhn01200  Carbon metabolism
rhn01210  2-Oxocarboxylic acid metabolism
rhn01240  Biosynthesis of cofactors
Module
rhn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhn_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AMJ98_CH02001 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AMJ98_CH02001 (lpdA)
   00620 Pyruvate metabolism
    AMJ98_CH02001 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AMJ98_CH02001 (lpdA)
   00640 Propanoate metabolism
    AMJ98_CH02001 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AMJ98_CH02001 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AMJ98_CH02001 (lpdA)
   00310 Lysine degradation
    AMJ98_CH02001 (lpdA)
   00380 Tryptophan metabolism
    AMJ98_CH02001 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AMJ98_CH02001 (lpdA)
   00670 One carbon pool by folate
    AMJ98_CH02001 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhn04147]
    AMJ98_CH02001 (lpdA)
Enzymes [BR:rhn01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AMJ98_CH02001 (lpdA)
Exosome [BR:rhn04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AMJ98_CH02001 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored FAD_binding_3 NAD_binding_8 HI0933_like GIDA DAO Thi4 Lys_Orn_oxgnase Amino_oxidase 2-Hacid_dh_C 3HCDH_N
Other DBs
NCBI-ProteinID: ANL09668
LinkDB
Position
2002135..2003580
AA seq 481 aa
MAESYDVIIIGSGPGGYVAAIRAAQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDFGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEAKITKP
GEIVVGKSSKPVVEPQHPLPKNVKGEGTYTAKHIIIATGARPRALPGIEPDGKLIWTYFE
ALKPDALPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEITAIARKQLE
KRGLKIFTSAKVTKVEKGAGSITAHVETADGKVQQITADRMISAVGVQGNIENLGLEALG
IKTDRGCVVADGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDKG
KVPGCTYCNPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKVIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgaatcctacgacgtcatcatcatcggctccggccccggcggctatgtcgccgcc
atccgcgcagctcagctcggcctcaagaccgcgatcgtcgagcgcgagcatatgggcggc
atctgcctgaactggggctgcatcccgacgaaggcgctgctgcgttcggccgaggtgctc
gatcacgccaatcacttcaaggatttcggccttgttctcgaaggcacggtcaagccggat
gccaaggccgtcgttggccgctcgcgcgctgtctccgcccgcctcaacgccggcgttggc
ttcctgatgaagaaaaacaagatcgacatcatctggggcgaagcaaaaattaccaagcca
ggcgagatcgtcgtcggcaaatcgtcgaaaccggtggtcgagccgcagcacccactgccg
aagaacgtcaagggcgagggcacctataccgccaagcacatcatcatcgcgaccggcgcc
cgtccgcgcgcgctgccgggcatcgagcccgatggcaagctgatctggacctatttcgag
gcgctgaagccggatgcgctgccgaagtcgctgatcgttatgggctcgggcgcgatcggc
atcgaattcgcaagcttctatcgttcgatgggtgttgatgtcacggtcgtcgaagtcatg
ccgaccatcatgccggtcgaggatgccgaaatcaccgccatcgcccgcaagcagctggaa
aagcgcggcctcaagatcttcaccagcgccaaggtcacgaaggtcgagaagggtgccggc
agcatcaccgcccatgtcgagactgcagatggaaaggtccagcagatcaccgccgaccgg
atgatttcggccgtcggcgttcagggcaacatcgaaaatctcggcctcgaggcgctcgga
atcaagaccgaccgcggctgcgtcgtcgccgacggttacggcaagaccaatgtcgccggc
atctatgcgatcggcgacgttgccggcccgccgatgctggcccacaaggccgagcacgag
ggtgtcgtctgcgtcgagaagatcgccggcctgccgaatgttcatcccaccgacaagggc
aaggtcccgggctgcacctattgcaatccgcaggtcgcttccgtcggcctcaccgaagcc
aaggccaaggagcttggccgcgacatccgtgtcggccgcttctccttcgcggcaaacggc
aaggcgatcgctctcggtgaagatcagggcatggtcaaggtgatcttcgacaagaagacc
ggcgagctgctcggcgcccacatggtcggcgccgaagtcaccgaactcatccagggcttc
gtcgtcgcgatgaacctcgaaacgacagaggaagagctgatgcatacgatcttcccgcat
ccgacggtatccgagacgatgaaggaagcggtgctcgatgcttatggtcgtgtgctgaac
gcttga

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