Rhizobium sp. N1341: AMJ98_CH02162
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Entry
AMJ98_CH02162 CDS
T04420
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhn03032
]
AMJ98_CH02162 (gyrA)
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH02162 (gyrA)
Enzymes [BR:
rhn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AMJ98_CH02162 (gyrA)
DNA replication proteins [BR:
rhn03032
]
Prokaryotic type
DNA Topoisomerases
AMJ98_CH02162 (gyrA)
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMJ98_CH02162 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
ANL09828
LinkDB
All DBs
Position
2169476..2172202
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AA seq
908 aa
AA seq
DB search
MEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDV
MGKYHPHGNAAIYDALARMAQPWSLRLPLIDGQGNFGSVDGDPPAAERYTECRLEKAAHS
LLDDLDKETVDFRDNYDGTLSEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDG
CIALINDPAIELPELMQIIPGPDFPTGAKILGRAGIRSAYETGRGSVIMRGVATIEPMRG
DREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLRDESDRQGYRVVIELKRDANAE
VILNQLYRYTPLQTSFGCNMVALNGGKPEQLTLLDMLRAFVSFREEVVSRRTKFLLRKAR
ERAHVLVGLAIAVANIDEVIRVIRQAPDPQSAREELMTRRWPAEDVESLIRLIDDPRHRI
NDDLTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGEEIRDYLDILSSRVRIQTIV
KDELSAVRDEFGTPRRTEIVDGGLEMDDEDLIAREDMVVTVSHLGYIKRVPLTTYRAQRR
GGKGRSGMTTRDEDFVSRLFVVNTHTPVLFFSSRGIVYKEKVWRLPIGTPTSRGKALINM
LPLEPGERITTILPLPEDEASWDNLDVMFSTTRGTVRRNKLSDFVQVNRNGKIAMKLEEE
GDEILSVETCTERDDVLLTTALGQCIRFSVDDVRVFAGRNSIGVRGINLGEGDRIISMTI
VGHVDAEPWERAAYLKRSAAERRATGVDEEDIALVGEEVTEEGQLSDERYEELKAREQFV
LTVSEKGFGKRSSSYDFRISGRGGKGIRATDTSKTGEIGELVAAFPVDDGDQIMLVSDGG
QLIRVPVGGIRIASRATKGVTIFSTAKDEKVVSVERISEPEEDETEGTVEGADETPVADG
DPGGAAEE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatgcagcggtcgtatctcgattacgccatgagcgtcatcgtcagccgcgcg
ctgcccgacgtgcgcgacggcctgaagcccgtgcaccggcgcatcctctacggcatgtcc
gagctcggcatcgactggaacaagaaatacgtcaaatgcgcccgtgtcaccggtgacgtg
atgggtaaataccatccgcacggcaacgccgcgatttatgacgcgctcgcccgcatggcg
cagccatggtcgctgcgcctgccgctgatcgacggtcagggcaatttcggctcggtcgac
ggcgatccgccggcggccgaacgatacaccgaatgccgcctggaaaaggctgcccattcg
ctgctcgacgatctcgacaaggaaaccgtcgacttccgcgacaactatgacggcacgctg
tccgagccggtcgtggttcccgccaaattccctaacctgctcgtcaacggcgccggcggt
atcgccgtcggcatggcgaccaacattccgccgcacaacctgtcggaagttatcgacggc
tgcattgcgctgatcaacgatccggcgatcgagctgccggaactgatgcagatcattccc
ggcccggatttccccacaggcgccaagatcctcggccgtgccggcatccgctcggcctac
gagaccggccgcggctccgtcatcatgcgcggcgtcgccaccatcgagccgatgcgtggc
gaccgcgagcagatcatcatcaccgaaattccctatcaggtgaacaaggcgacgatgatc
gagaagatggccgagttggtgcgtgaaaagcgcatcgaaggcatctccgatctgcgcgat
gaatccgaccgccagggctatcgcgtcgtcatcgaattgaagcgcgatgccaatgccgag
gtcatcctcaatcagctttaccgctacacgccgctgcagacctccttcggctgcaatatg
gtggcgctgaacggcggcaagccggagcagttgacgctactcgacatgctgcgcgccttc
gtctccttccgcgaagaagtcgttagccggagaacgaaatttctgcttcgcaaggcgcgc
gagcgcgcccacgtcttggttggtctcgccatcgccgtcgccaatatcgacgaagtcatt
cgcgtcattcgtcaggcgccggatccgcagtcggcccgcgaagagctgatgacgcgccgc
tggccggccgaagatgtcgaaagcctgatccgtctgatcgacgatccgcgccaccgcatc
aacgacgatctcacctacaacctctcggaagagcaggcgcgcgctattctcgagctgcgc
cttgcccgcctgactgcactcggtcgtgacgaaatcggtgatgagctcaataagataggc
gaggaaatccgggattatctcgatattctttcctcgcgtgtccgcatccagaccatcgtc
aaggacgagctttccgccgtccgcgacgagttcggcacgccacgccgcaccgagatcgtc
gatggcggcctggagatggacgacgaggatctgatcgcccgcgaagacatggtggtcacc
gtctcgcatctcggctacatcaagcgcgtgccgctgaccacctaccgcgcccagcgccgc
ggcggtaagggccgctccggcatgacgacccgcgatgaggatttcgttagccggctattc
gtggtcaatacccatacgccggtcctgttcttctcctcccgcggcatcgtctataaggag
aaggtctggcgtctgccgatcggcacgccgacctcgcgcggcaaagcgctgatcaacatg
ctgccgctcgaacccggcgaacgcatcaccaccatcctgcccttgcccgaggacgaggcg
agctgggacaatctcgacgtcatgttctcgacaacgcgcggtacggttcgccgcaacaag
ctgtcggacttcgtccaggtcaaccgcaacggcaagatcgccatgaagctggaggaggag
ggcgacgaaatcctctccgtcgagacatgcaccgagcgggacgacgttctcctgaccacg
gcgctcggccagtgcatccgcttctccgtcgacgacgtccgcgtctttgccggccgcaac
tcgatcggcgtgcgcggcatcaatctcggcgagggcgaccgcatcatctcgatgacgatc
gtcggccatgtcgatgcggagccgtgggaacgggccgcctatctcaagcgttccgccgcc
gagcgtcgcgcgacgggcgtcgatgaagaggatatcgcgcttgtcggcgaggaagtcact
gaggagggacagctctccgacgaacgctacgaagagctgaaggcacgcgagcagttcgtg
ctcaccgtctccgaaaagggcttcggcaagcgttcgtcttcctacgacttccgcatctcc
ggccgtggcggcaagggcatccgcgccaccgacacgtcgaagaccggcgagatcggcgaa
ctcgttgcagccttcccggtcgatgacggcgaccagatcatgctcgtctccgatggcggc
cagttgatccgcgtaccggtcggaggcatccgcatcgccagccgcgccaccaagggcgtc
accatcttctccacggccaaggacgagaaggtcgtttcggtcgagcgcatcagcgagccg
gaggaggatgagacggaagggaccgtcgaaggcgccgatgagacgcctgtcgccgatggc
gatccgggcggtgctgccgaagaatga
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