Rhizobium sp. N1341: AMJ98_CH02199
Help
Entry
AMJ98_CH02199 CDS
T04420
Name
(GenBank) GGDEF/EAL domain-containing protein
Organism
rhn
Rhizobium sp. N1341
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE
SLATT_1
Motif
Other DBs
NCBI-ProteinID:
ANL09865
LinkDB
All DBs
Position
complement(2208673..2210934)
Genome browser
AA seq
753 aa
AA seq
DB search
MKFRRHTKAIRSLAGSLMSHASAFAPALFAAIIAAIVVWVATNWRLERSLADERSVVAGE
LATISSRLQTNLNSNVKLLQGLAAGIAVDPAMGQNKFSKLAAQILQPDSQLRSFAAAPDM
VVQWVYPETGNEKAIGLDYRKNEKQRAAAMLARNTHNIVLTGPVELVQGGTAFVVRCPVY
VDDGNSQIFWGLLSGIVDIPRLYRDSGLSSTDLEIAISTTPEPNSPKQVFLGSLETFGKK
PVVASVDMTYGRWSLAALPRNGWGQNNGIGTFELYASLLALCVVAPIVWVGFLTKSRQKT
IEKLRLHKSKLVRARQRLEHLSLHDALTGLPNRRFVDQMISQPPRPDPQDRLILIHIDLD
RFKEINDTKGHAGGDMVLQTTASRLADLTGPNDVAARIGGDEFVVASWSTDPEPKAAELA
RQIVDALQQTIFIDGAGYVVGASVGVAWETESARDRDLGQLLLNADLALYEAKKAGRGRA
AVFTEELRSAAIHAKELADEFNQALERDELVAFFQPQFNANTLDIAGVEALARWDHPRKG
LLGPNAFLDAAEKLGRSGDMDKLILQKALFELTRWDGLGMYIPRVSVNISARRLAQANLL
AELSALPAAKGRLCFELLETISFDELQPALNEVIPAIKALGIEIEIDDFGTEHASIVSLL
RFEPRRLKIDREIIKPIIASPSQRRLVSSIIEIGRSQNIDIVAEGVETMEHAKILKDLGC
HLLQGYALARPMTSDQLIEFCRMKGKGTARAGR
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgaagacatacaaaggcaattcgcagcctcgcgggctccctgatgagccat
gcgagcgccttcgctccggcactatttgcggccattatcgcagccatcgtcgtctgggtg
gcaacgaactggcggcttgagcggtcgttggccgacgaacgctcggttgttgccggcgag
cttgcgacgatatcatctcgacttcagacaaacctcaacagcaatgtgaagctgttgcaa
ggtttggcggcgggtatcgcggtcgatccggcgatgggccagaacaaattttccaaactt
gccgcgcagattctgcagcctgattcgcaattgcgaagcttcgctgcagcgcccgacatg
gtggtccagtgggtttatccggaaacaggaaacgaaaaagccatcggactcgactaccga
aaaaatgagaagcaacgggccgctgcgatgctggcgcgcaacacccacaatatcgtcctc
acgggcccggtggaacttgtccaaggcggaacggctttcgttgtcaggtgtccggtttac
gtcgacgacggaaacagccagatcttttggggtctgctttctggaatcgtcgatattccg
aggctataccgggatagcggccttagttcgaccgaccttgagatcgccatcagcacgacg
ccggagccgaattcgcccaaacaggtctttctcggcagcctggaaacttttgggaagaag
ccggtcgtcgcctccgtcgatatgacttacggccgatggtccctcgccgcacttccgagg
aatggctggggccagaataacggcatcggcacttttgagctctatgccagtctgttggcc
ttgtgcgtcgtcgcaccgatcgtctgggtgggctttctgaccaaatcccgccagaagacc
atcgaaaagcttcgccttcacaagagcaagctcgtccgggcccggcagaggctggagcac
ctgtcgctgcatgatgccctcaccgggctacccaatcggcggtttgtcgaccagatgatc
tcgcagccgccgaggcccgatccgcaggaccgtctgatcctcatccatatcgaccttgac
cggtttaaagagatcaacgacacgaaggggcacgccggcggtgacatggtcctgcagaca
accgcttcgcggcttgccgatttgaccggaccgaacgatgttgcagcacgcatcggcgga
gacgagttcgttgtcgccagctggagcaccgatcccgagcctaaagcagccgaattggcc
agacagattgtcgacgcgctgcagcagaccatttttatcgatggagctggttatgtagtc
ggcgccagcgtcggtgtcgcctgggagactgaaagcgcccgcgaccgcgacctcggccag
ctgcttctgaatgccgatctggcgctgtacgaggcgaagaaagccggccgcggccgcgca
gccgtttttaccgaggagcttcgcagcgcggcaatccatgcaaaagaactggcggatgaa
ttcaaccaagcgctcgaacgcgatgaactcgttgcattcttccagccgcagttcaatgca
aacacgcttgatatcgcaggtgtcgaagcgcttgcccgctgggatcatccgcgaaaaggt
ctgctcggcccgaacgcatttctggatgctgcggaaaaactggggcgcagcggcgatatg
gacaagctgatcctgcaaaaggcgctgttcgagctgacgcgctgggacggcttgggaatg
tatattccacgggtctccgtcaatatttcagcgcgccggctggcgcaggcaaatctgctc
gccgagctgtccgcgcttcccgcagcgaagggtcgcctatgtttcgagctgctcgagaca
atctccttcgacgagcttcagcctgctctcaacgaggtcattccggcaatcaaagcgctg
ggcatagaaatcgagatcgacgatttcggcacggaacatgccagtatcgtcagcctgctt
cgatttgaaccgcgacggctcaagatcgaccgagagatcatcaagccgatcatcgcctcc
ccctcgcaacgccgtctggtctcctccatcatcgaaatcggccggtcgcagaacatcgac
atcgttgccgagggcgtggagacaatggagcacgcgaagatcctgaaagatctcggttgc
catttgctccagggttacgccctggcccgacccatgacctcggatcagttgatcgaattt
tgccggatgaagggcaagggaacagcaagggcaggccgatag
DBGET
integrated database retrieval system