Rhizobium sp. N1341: AMJ98_CH02435
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Entry
AMJ98_CH02435 CDS
T04420
Name
(GenBank) L,D-transpeptidase domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhn01002
]
AMJ98_CH02435
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhn01011
]
AMJ98_CH02435
Peptidases and inhibitors [BR:
rhn01002
]
Cysteine peptidases
Family C82
AMJ98_CH02435
Peptidoglycan biosynthesis and degradation proteins [BR:
rhn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AMJ98_CH02435
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ANL10093
LinkDB
All DBs
Position
complement(2442889..2444790)
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AA seq
633 aa
AA seq
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MTFVLKSAVSALAVSCGLAMMAAPAHAYTLMDMLRGDRQRTQSTIFMDQMPPGRVAPRGG
EGGSLGGLDPEAPLPKVSGPRYYTYKTEALQFVDTSKFADPIVTGAVAEVSPGSDSEPVV
QRRFLAQAKVRANADVAKALETYYSDSRNPLVWVDGNQINERAQSAMAALADAASVGLDP
ADYAVQAPAVDPANPDPAARDRMLTQFELELSAKVLAFVQDTVRGRIDPNKISGYHDFQR
KVVNLAPVLKLARMSPNAGAYIASRSPDSPQFEALKAELAKLRAADSNEEQIVISLQGLL
KPGDSSSEIANIVKALQKHGSETLKTDHAATFAAYVGGSDYSPDIVSLVEDFQKEHGLKP
DGVIGQATVRAMTGGDTNASKIDKLVVAMEQVRWLPEDLGSRYVMINQPAYMAYYHNDGK
EQLSMRVVVGGKNNQTYFFNDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYE
VEVNGHAVASSSVDWYGSTANVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKR
DMRALSHGCVRLANPRAMAAAVLGTTADDVARQIASGQNHAVKVPQKIPVYVSYFTAWPN
KDGVVEYFDDVYGRDAYVDKAFDATTKARGAQI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgttttgaaaagcgcggtatccgcattggcagtttcttgcggcctggcaatg
atggccgctcccgcgcatgcctatacgctgatggatatgctgcgcggcgacaggcagcgg
actcagagcaccattttcatggatcagatgccgcccgggcgtgtggcgccgcgtggcggc
gaaggcggatcgcttggcgggcttgacccggaggcgccgctgccgaaggtcagcggtccg
cgttattatacctacaagaccgaagccctgcagttcgtcgataccagcaagttcgccgat
cccatcgtcacgggtgcggttgccgaggtttcgcctgggagcgattccgaaccggtggtg
cagcgccgcttcctggcgcaggccaaggttcgcgccaatgccgacgtcgccaaggcgctg
gaaacctattacagcgatagccgcaatccgctcgtctgggtcgacggcaaccagatcaac
gagcgcgcccagtcggcaatggcggcgctggccgatgcggcttccgtgggcctcgaccct
gccgattacgccgtgcaggcgccggcggtcgatccggccaatcccgatcctgccgcgcgc
gaccgaatgctgacgcaattcgagctggaactttcggccaaggtgcttgccttcgtgcag
gacacggtccgcggccgcatcgatccgaacaagatttccggctatcacgatttccagcgc
aaggtcgtcaatctggcaccggtgctgaagcttgcgcgcatgagcccgaatgccggcgcc
tatatcgccagccgttcgcccgatagcccgcagttcgaggcgctgaaggcggagcttgcc
aagcttcgcgccgccgatagcaatgaggagcagatcgtcatttcgctccaagggctgctc
aaacccggcgacagttcgtccgagatcgccaatatcgtcaaggcgctgcagaagcacggg
tccgagacgctgaagaccgatcatgcggcgacgtttgcagcctatgtgggcggcagcgac
tattcgcccgacatcgtctcgctggtggaggacttccagaaggagcacggtctgaagccc
gatggtgtcatcggccaggcgaccgtgcgcgccatgaccggcggtgacaccaatgcctcg
aagatcgacaagctcgtcgtcgccatggaacaggtgcgctggctgccggaagatctgggt
tcccgctacgtcatgatcaatcagccggcctacatggcctactaccataatgacggtaag
gaacagctgtcgatgcgcgtggtggtcggcggcaagaacaaccagacctatttcttcaac
gacgagatcgagacggtggagttcaacccgttctggggcgtgccacagtcgatcatcatc
aacgaaatgctgccgaagctgcggtcggacccgaactacctcgatcagctcggttatgag
gttgaggtgaatggccatgccgtcgcctcgtccagcgtcgactggtacggctcgaccgca
aatgtttcggtgcgccagccgccaagcagcgataacgccctcggcgaactgaagatcctg
ttcccgaacagccacgcgatctacatgcacgatacgccctcaaagagcttcttcaagcgc
gacatgcgggcgctcagccacggttgtgtgcgccttgccaatccgcgcgcgatggcagcc
gccgtgctcggcacgacggccgacgatgtcgccaggcagatcgcgagcggccagaatcat
gcggtgaaggtgccgcagaagatcccggtctacgtctcctatttcaccgcctggccgaac
aaggatggcgtggtggagtatttcgatgacgtctacggccgtgacgcctatgtcgacaag
gctttcgatgcgacgaccaaggcgcgtggggcacagatctga
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