Rhizobium sp. N1341: AMJ98_CH02539
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Entry
AMJ98_CH02539 CDS
T04420
Symbol
fnrN-1
Name
(GenBank) transcriptional activator FnrN 1
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhn03000
]
AMJ98_CH02539 (fnrN-1)
Transcription factors [BR:
rhn03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AMJ98_CH02539 (fnrN-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_24
HTH_20
LexA_DNA_bind
Sigma70_r4_2
HTH_11
MarR
Sigma70_r4
HVO_A0261_N
MarR_2
Xre-like-HTH
NirdL-like_HTH
MreC
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ANL10195
LinkDB
All DBs
Position
2545635..2546354
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AA seq
239 aa
AA seq
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MDVASSEIFETGTPVACRSCQARHGVVCGALSNAQLKELNRHSLRRKIEAGSEIVAQGSE
SSFYSNIMRGVVKLCKMMPDGRQQIVGLQFAPDFVGRPFVRESTLSAEAATDAEICVFPR
NLLDRMIAETPELQRRLHDQALNELDAARDWMLTLGRRTAEEKVASLLHLIATHAEPQTA
VSTAFDLPLSRAEIADFLGLTIETVSRQMTRLRKRGVILIENSRHIVIPDLDELERISA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgccagcagcgagattttcgagacaggcacgcccgtcgcatgtcgttcctgt
caggcgcggcacggcgtcgtctgcggcgccctgtcgaacgctcagttgaaggagctcaac
cgccactccctgcgccgcaagatcgaggccggctcggagatcgttgcgcaaggatcggaa
agttcgttttattcgaacatcatgcgcggcgtggtgaagctctgcaagatgatgccggac
ggacgccagcagatcgtcggcctgcagttcgctcccgatttcgtcggcaggcccttcgtc
cgcgaaagcacactatcggcggaggcggcaaccgacgccgaaatttgtgtcttcccgcgc
aacctgctcgaccgcatgatcgcggagacgccggagctgcagcgcaggctgcacgatcag
gcgctcaacgagctggacgccgcgcgcgactggatgctgacgctcggccgccgcacggcg
gaggagaaggttgcaagcctgctccacctcattgcaacccatgccgagccgcaaaccgcc
gtcagcacggccttcgatttgccgttatcgcgcgccgagatcgccgattttctcgggctg
acgatcgaaaccgtcagccggcaaatgacaaggctgcgcaagcggggtgttatcctgatc
gagaactccagacatatcgtcattcccgatctggatgagctggaaaggatcagcgcctaa
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