Rhizobium sp. N1341: AMJ98_CH02571
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Entry
AMJ98_CH02571 CDS
T04420
Name
(GenBank) mechanosensitive ion channel MscS protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhn02000
]
AMJ98_CH02571
Transporters [BR:
rhn02000
]
Other transporters
Pores ion channels [TC:
1
]
AMJ98_CH02571
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ANL10227
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Position
2578685..2580841
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AA seq
718 aa
AA seq
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MVVLSRIRTIVPFSAGAALASLLLCASIAMAQSAMPADPQPESVQRFIGMFSDPDVQHFL
QQQSQAARHVPEPTPEAPNRDPSFSEFAMRFRAHGSGLLGAVNSFPLEATRAWAMVETDI
EANGGTRPIFLIAAFVAAGLAAQRLFWWVSAGWRTWMSHASYATVSGRVVALAARLLWAG
CYVLSFGLGSIGFFLLFQWPPVIREIVVGYLLAIVIFRLGNALLDVFLLPRAEEEGGFRV
VPLAGDAARHWTKRLGYLVGWYAFGWVTIRLFGTLGFSLPARQLAAYCLGLILLLIGIEA
VWRRPSRSSSSQTSRIGMRARNWLWTAYFFAVWLLWVVGAMRLFWIVVVGAALPAAIALT
KASVDNILRSSAAEEDGHKRSTVVSVIVERGIRAALIVAAIILLAQALDVRLTEMTMQDS
PLLRLVRGLLSAGIILMVVDLAWNLVRVLIDRKLGATEAVLEAGSDRERRRMRIRTLLPI
LRNFLMILFVAIAIMMALSSLGVEIGPLIAGAGVVGVAVGFGAQTVVKDVISGVFYLLDD
AFRVGEYIQSGSYKGTVESFSLRSVKLRHHRGAVFIVPFSELGAIQNLSRDWVIEKMTIT
VTYDSDIEKARKIIKKIGLELFEDPEFKATTIEALKMQGIDSLGDSGLLLRMKVMTLPGQ
QFTLKRRALRMIHEAFHENGIKLAVPTVQVSGGNDDAVGAAAQQTIAAHNAAIAAGPA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgctgtctaggatccgcacgatagtgccgttttccgcaggggccgctctggct
tctctgctactctgcgcctcgattgcaatggcgcagagcgcgatgcctgcggacccgcag
cctgaaagcgtccagcgcttcatcggaatgttctcggatcctgacgtccagcacttcctg
cagcagcagtcgcaggccgccaggcatgtgccggaaccgacgccggaagcgccgaaccgc
gacccctctttctccgaattcgcgatgcggttccgcgcccacggttccggccttctcggc
gcggtgaattccttccccctggaggcgacccgggcctgggccatggtcgaaacggacatc
gaagcaaacggcgggacgcggccgatcttcctgatcgccgccttcgttgccgccgggctg
gccgcacaacggctgttctggtgggtcagcgccggctggcgcacatggatgtcgcacgca
tcgtatgcgacggtatcggggagagttgtcgcattggcggcgaggcttctgtgggcggga
tgttacgttctttccttcggcttgggcagcatcggctttttcctgctgttccaatggccg
cccgtcataagggagatcgtcgtcggatatctcctggcaatcgtcatcttccgtctgggg
aacgcacttcttgatgttttcctgctgccgcgggccgaagaagagggcgggtttcgagtc
gttccgctcgctggggatgctgcgcgccactggacgaaacggctgggttatctcgtcggc
tggtatgccttcggatgggtcaccatccgcctgttcggcacgttgggtttttccctcccg
gctcggcagctcgccgcctattgccttggcctcatacttctcttgatcggcattgaagcc
gtgtggagacgtccgtcccgatcatcgtccagtcaaaccagccgcatcggcatgcgggcg
cgcaactggctctggacagcctatttctttgccgtctggctgctgtgggtggtcggcgcc
atgcggctgttctggattgtcgtggtcggtgccgccctgcctgccgccatcgctctgacc
aaggcctcggtcgacaatatcctgcggtcttccgcagccgaggaggacggtcacaagcga
agcaccgtcgtctcggtgatcgtcgaacgcgggatcagggccgcactgatcgtcgcagcc
atcatcctgcttgcacaggcgctcgacgttcggttgactgagatgacgatgcaggattcc
ccgcttctgcgactcgtgcgtggcctcctcagcgccgggatcattctcatggtcgtcgat
ttggcgtggaacctcgtgagagtcctgatcgatcgcaagctcggcgccaccgaggcggtc
cttgaagccggaagcgatcgggaacggcggcgtatgcgcatcaggacccttctgccgatc
ctgcgcaatttcctgatgatcctcttcgtcgcaatcgcgatcatgatggccttgtcatcg
ctcggcgttgaaatcggtccgttgatcgcaggcgcaggcgtggtcggtgtcgcagtcgga
ttcggggcgcagaccgtggtcaaggacgtcatcagcggggtgttctacctgctcgatgat
gccttcagggtgggcgaatacatccagagcggcagctacaagggcactgtcgagtcgttc
agcttgcgatccgtcaagcttcggcaccaccgcggcgcagtcttcatcgtccctttcagc
gagctcggagcgattcagaacctgagccgcgattgggtgatcgagaagatgacgatcacc
gtcacctacgattccgacatcgagaaggcccgcaagatcatcaagaagatcggcctcgaa
ctgttcgaggatccggagttcaaagctaccaccatcgaggcgctgaaaatgcaggggatc
gacagcctcggtgactccggtctgctcctgcggatgaaggtcatgacccttccgggccag
cagttcacgctaaagcggcgggcactccgaatgatccatgaggcgttccacgagaacggt
atcaagctcgccgtgccgaccgttcaggtctccggtggaaacgacgacgccgtcggcgcc
gccgcccaacagacgatcgcggcgcacaatgcggcgatcgccgcggggccggcctga
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