Rhizobium sp. N1341: AMJ98_CH02938
Help
Entry
AMJ98_CH02938 CDS
T04420
Name
(GenBank) mechanosensitive ion channel MscS protein
Organism
rhn
Rhizobium sp. N1341
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
cNMP_binding
MS_channel_3rd
Dsc3_C
Motif
Other DBs
NCBI-ProteinID:
ANL10579
LinkDB
All DBs
Position
2959078..2960559
Genome browser
AA seq
493 aa
AA seq
DB search
MIYDALFGKPLISLIVVGFAGILVWYFLSSQRPTTRLVVQILFFAVMTLILAGSGIEPHR
FQGYQSEDPQALLVIVAKSLWWVHLAWAVIGFIRLYLVLEGSPREARLLQDLVIGIVYIG
MALSVLAFVFGVPIGTLVATSGVVAIILGLALQNTLADVFSGIALTLGRPYVIGDWILLS
DGTEGRVVESNWRATHILTGANNVVVLPNSLLAKLGLTNVSRPDETHLLILTIRIAPTRM
PASIRQVMLSALTSCNSIVREPPPVVSLKGLDATALEVELQFRVTSPSQRVTARNEVLDL
VYRHCKSAGLLLAVPPAAQVLTADLPTEENAKPPTVTPLALIEAIPVFATLTSDERQRLA
ETTTVRQFRKGDVIVRESEMLPSLMMVRAGIIVARREGEERGRFAPGDFFGETGLLAGMQ
EVCTLEALTPVTIYEIGQAAFAPLLSERPALAEEIAEALAGRAERFRDGVNLPPEQARNA
HAILKTIRTIFRA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatctacgacgcgctgttcggcaagccgctgatctccctcatcgtcgtcggctttgcc
ggcatcctcgtctggtatttcctctccagtcagcggccgacgacgcggctggtggtgcag
atcctcttctttgctgtgatgacgctgatcctcgccggcagcggcatcgagccccaccgt
tttcagggatatcagtccgaagacccgcaggccctgctcgtcatcgtcgccaaatcgctc
tggtgggtccacctggcatgggccgtgatcggtttcatcaggctctatctggtgctggag
ggaagcccgcgtgaggcccgcctgctgcaggatctcgtcatcggcatcgtctatatcggc
atggcactctcggtcctcgctttcgtcttcggcgtaccgatcggcactctcgtcgcgaca
tcaggcgtggtcgccatcatcctcggcctggcgctccagaacacgctcgccgacgtcttt
tccggcatcgcgctgacgctcggccggccctatgttatcggcgactggatcctcttgagc
gacggcacggaagggcgcgtcgtcgaaagcaactggcgcgcgacgcacatcctgaccggc
gccaataatgtcgtcgtcctgcccaacagcctcctggcgaaactcggcctgaccaatgtc
agccggccggacgagacccatctgctgatcctcaccatccgcatcgctccgacccggatg
ccggcatcgatccgccaggtcatgctctcggcgctcacgagctgcaattcgatcgtgcgc
gagccgccgccggtcgtctcattgaaggggttggacgccaccgcgctcgaagtcgagctg
cagtttcgggtgacgagccccagtcagcgcgtgacagcgcgaaatgaggtgctcgatctc
gtctatcgccattgcaaatccgccggcttgcttttggccgttccacccgcagcccaggtg
ctgaccgccgatctgccgacggaagaaaacgccaagccgccgaccgtcacgccgcttgcg
ctgatcgaagcgattcccgtctttgcaacactgacatcagatgagaggcagaggctcgcc
gagaccacgactgtccggcagttccgcaaaggcgatgtgatcgtgcgggagagcgaaatg
ctgccctcgctgatgatggtgcgcgccggtatcatcgtggcgcgtcgcgaaggcgaagag
cgcggacggtttgcgccaggtgatttcttcggcgagacaggcctgctcgccggcatgcag
gaagtctgcaccttggaggccctgaccccagtgacgatctatgaaatcggtcaggcggcc
ttcgccccgctgcttagcgaacgcccagccctggccgaagagatcgccgaagccctcgcc
ggccgcgccgaacgcttccgcgacggcgttaacctgcccccggaacaagcacgcaacgcg
cacgcaatcctgaagaccatcaggaccatcttcagggcatga
DBGET
integrated database retrieval system
