Rhizobium sp. N1341: AMJ98_CH03535
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Entry
AMJ98_CH03535 CDS
T04420
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhn03009
]
AMJ98_CH03535 (rluD)
Enzymes [BR:
rhn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AMJ98_CH03535 (rluD)
Ribosome biogenesis [BR:
rhn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AMJ98_CH03535 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF3658
BON
Motif
Other DBs
NCBI-ProteinID:
ANL11156
LinkDB
All DBs
Position
3584866..3585891
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AA seq
341 aa
AA seq
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MSDPFKQAGGIRKVLTADETAEGRLDAWLTAQVGEDFSRSRIKALIKEGRVSLRGEQVTD
PQRKVRVGDSFEITLPEPEDPTPKGEDIPLDILYEDDDLIVISKPAGLVVHPGSGNWTGT
LVNALIHHCGDTLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDVAHRHLSLQFADHGRTMP
LERAYRAVVWGRPRTLSGTIDAPLGRATGDRTRRAVKRPDSQDADAAITHYEVIERFQEN
PDATALASLVECHLETGRTHQIRVHMAHIGHPLVGDTVYGAGFRTKANLLPEEIRKVVNG
FGRQALHAFMLQFEHPRTGELMHFEVPLPADMVKLVEALRQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacccctttaaacaagcaggcggcattagaaaagtcctcaccgccgatgaaacc
gccgaaggccggctcgacgcctggctgacggcgcaggtcggtgaggatttttcccggagc
cgcatcaaggcgctgatcaaggaggggcgggtttctttgcgaggcgagcaggttaccgat
ccgcagcgcaaggtgcgcgtcggcgacagcttcgaaatcaccctgcccgagcctgaagac
ccgaccccaaagggcgaagatatcccgctcgacatcctttatgaggacgatgaccttatc
gtcatatcgaaaccggcaggtctggtcgtccatcccggctccggcaactggacaggaacg
ttggtcaacgcgctgatccatcattgcggcgatacgctttccggcatcggcggcgtgcgc
cgtcccggcattgtccatcgtctcgacaaggatacaacaggagtcatggtcgtcgccaag
aacgacgtcgcccatcgccacctctcgcttcaatttgccgaccacggccgcaccatgccg
ctggagcgggcctaccgggcagtcgtctggggccgtccccgcactctgtcgggaacaatc
gatgcccctctcggccgcgccaccggtgaccgcacccgccgggccgtcaagcgccccgac
agccaggatgccgatgcggcaatcacccactacgaagtgatcgagcgcttccaggagaac
cctgacgcgaccgcgctcgcctcgctggtcgagtgccacttggaaaccggccgcacccat
cagatccgcgtgcacatggcccatatcggtcatccgctcgttggcgacaccgtttatggc
gccggcttcaggaccaaggccaatcttctgcccgaagagatccgcaaggtcgtgaatggg
ttcggccgtcaggcactgcatgccttcatgctgcaattcgagcatccccgcaccggcgaa
ctcatgcatttcgaagtaccgctgccggccgacatggtgaaactggtcgaggcattgcgg
caataa
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