Rhizobium sp. N1341: AMJ98_CH03892
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Entry
AMJ98_CH03892 CDS
T04420
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMJ98_CH03892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhn02000
]
AMJ98_CH03892
Transporters [BR:
rhn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AMJ98_CH03892
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
ANL11498
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Position
3979612..3980772
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AA seq
386 aa
AA seq
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MTNLLKSCTAAIACLSFATQVTAAEPLKALGKGEGAISIVAWAGYIERGETDKNYDWVTG
FEKETGCKVSVKTAATSDEMVSLMNEGGFDLVTASGDASLRLIAGKRVQPINTDLIPSFK
NVDQRLQNGAWYTVGGVHYGVPYLWGPNVLMYNTDAFKDKAPTSWNVVFEEETLPDGKSN
KGRVQAYDGAIYIADAAMYLMAHKPDLGIKDPYELTEDQYKAALDLLRGQRKLISRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLLQADKQKIASTFPDEGVTGWADTTMLHADSEHPNC
AYMWMEHSLQAKVQGDAAAWFGAVPSVPTACKGNELMGDTGCATNGFDHFDKIKFWKTPV
AKCATQSECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctcttgaaatcctgcacggcagcgatcgcctgtctgagtttcgcgacgcag
gtgaccgccgccgaaccgctgaaggcgctgggcaagggcgagggtgcgatcagcatcgtc
gcctgggccggctacatcgaacgcggcgaaaccgacaagaattacgactgggtcaccggc
ttcgaaaaggagaccggctgcaaggtttccgtcaagaccgccgccacctcggatgaaatg
gtctcgctgatgaacgagggcggcttcgacctcgtcaccgcatcgggcgatgcgtcgctg
cgcctcatcgccggcaagcgtgtccagccgatcaacaccgatctgatcccgagcttcaag
aatgtcgaccagcgcctgcagaacggcgcctggtatacggtcggcggcgtacattacggc
gtgccctacctctggggcccgaatgtgctgatgtacaataccgatgccttcaaggacaag
gcgccgaccagctggaatgtcgtcttcgaggaagagacgctgcccgacggcaaatcgaac
aaaggccgcgtccaggcctatgacggcgcgatctatatcgccgatgcggccatgtatctg
atggcccacaagccggatctcggcatcaaagacccgtacgaactcactgaagaccagtac
aaggcggccctcgacctgttgcgcggccagcgcaagctcatctcgcgctactggcacgac
gcgatgatccagatcgacgacttcaagaacgaaggcgtcgtcgcttccggctcctggccc
ttccaggtgaacctgctgcaggccgacaagcagaagatcgcctccaccttcccggatgaa
ggcgtcaccggctgggccgacacgacaatgctgcacgccgacagcgaacacccgaactgc
gcttatatgtggatggaacattcgctgcaggccaaggtccagggcgacgccgccgcctgg
ttcggcgccgttccctccgttcccaccgcctgcaagggcaacgaactgatgggcgatacc
ggctgcgccaccaacggcttcgatcacttcgacaagatcaagttctggaaaaccccggtc
gccaaatgcgccacgcaaagcgaatgcgtgccctatcatcgctgggtatcggattacatc
ggcgtgatcggcgggcggtaa
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