Rhizobium sp. N1341: AMJ98_CH04183
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Entry
AMJ98_CH04183 CDS
T04420
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn02024
Quorum sensing
rhn03060
Protein export
rhn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AMJ98_CH04183 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AMJ98_CH04183 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMJ98_CH04183 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhn02044
]
AMJ98_CH04183 (ffh)
Enzymes [BR:
rhn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AMJ98_CH04183 (ffh)
Secretion system [BR:
rhn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AMJ98_CH04183 (ffh)
Eukaryotic Sec-SRP protein
AMJ98_CH04183 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_30
DnaB_C
AAA_22
AAA_31
AAA_19
ArsA_ATPase
6PF2K
AAA_17
AAA_25
AAA_14
ResIII
AAA
AAA_7
APS_kinase
Thymidylate_kin
AAA_5
AAA_16
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ANL11774
LinkDB
All DBs
Position
4271483..4273060
Genome browser
AA seq
525 aa
AA seq
DB search
MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAV
GAEILKSIKPGQMVVKIVHDELIEMLGGEGVGIDLHAAAPVVVMMVGLQGSGKTTTSAKI
ANRLSTREKKKVLMASLDTRRPAAQEQLRQLGAQANIDTLPIIAGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMSELEEFHPRRIADRILGMGDI
VSLVERAAENIDAEKAAAMAAKMAKGKFDLDDLADQLRQMQKMGGMGGIMGMMPGMAGMK
DKMAAAGLDDKLFGRQIAIIQSMTKAERANPDLLKHSRKKRIAAGSGTDAAAINKLLKMH
RQMADMMKMMGGKGKGGLMKQMMGGLAGKMGLGGGGMGGMPDLSNIDPRQLEALQKQAEA
AGLGKPGGGMPGLGGLPGGLPGLGGAKLPGLGGGFPGLPGLPKKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgtcttggatccattctgaatggactgacaggccgtggc
gcgctttcggaagccgatgtttccgcagcgctgcgcgaggttcgccgcgcgctgctggag
gccgacgtcgcgctcgacgtcgtgcgttccttcaccgaccgcgtgcgtgaaaaagccgtc
ggcgccgagatcctgaagtcgatcaagcccggccagatggtcgtcaagatcgtccatgac
gaactgatcgagatgctgggcggcgaaggtgtgggcatcgacctgcatgcggccgccccc
gtcgtcgtcatgatggtcggccttcagggctcgggcaagacgacgacgtcagccaagatc
gccaatcgtctgtcgacgcgcgagaagaaaaaggtgctgatggcgtcgctcgacacgcgc
cgtccggccgcgcaagagcagcttcgccagctcggcgcgcaggccaatatcgacacgctg
ccgatcattgcaggccagtcgccgaccgatatcgccgcccgcgccgtgcaggcggccaag
ctcggcggccatgacgtcgtcatcctcgacaccgccggccgcacccatatcgacgagccc
ttgatggtcgagatggccgacatcaagaagcgctcgaacccgcatgaaatcctgctggtc
gccgacagcctcaccggccaggacgccgtcaacctcgcccgcaattttgacgaacgcgtc
ggcatcaccggcttggtgctgacccgcatggacggcgacggccgcggcggtgctgccctt
tcgatgcgcgccgtcaccggcaagccgatcaagctgatcggcgtcggcgagaagatgagc
gagctcgaggagttccatccccgccgcattgccgaccgcattctcggcatgggcgatatc
gtttcgctcgtcgagcgcgccgctgagaatatcgacgccgaaaaggcggccgccatggcc
gccaagatggccaagggcaagttcgatctcgacgacctcgccgatcagctgcgccagatg
cagaagatgggcggcatgggcggcatcatgggcatgatgcccggcatggccggcatgaag
gacaaaatggccgcagccggcctcgacgacaagcttttcggccgccagatcgccatcatc
caatcgatgaccaaggccgagcgcgccaatcccgacctgctcaagcattcgcgcaagaag
cgcatcgccgccggctccggcaccgatgccgccgccatcaacaagcttctgaagatgcac
cgccagatggccgacatgatgaagatgatgggcggcaagggcaaaggcggcctgatgaag
cagatgatgggcggccttgccggcaagatggggcttggcggcggcggcatgggcggcatg
cccgatctctcgaatatcgatccccgtcagctcgaagccctgcagaagcaggcggaagcg
gcgggtttgggaaaaccgggcgggggtatgcccggtctcggcggtctgccgggtggtttg
ccgggcctcggcggcgccaagctgccgggccttggcggtggtttcccgggcttgcccggc
ttgccgaagaagaagtga
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