Rhizobium sp. N1341: AMJ98_PB00103
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Entry
AMJ98_PB00103 CDS
T04420
Name
(GenBank) IclR family transcriptional regulator protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhn03000
]
AMJ98_PB00103
Transcription factors [BR:
rhn03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AMJ98_PB00103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
TrmB
HTH_23
HTH_20
HTH_DeoR
GntR
HTH_29
HTH_7
HTH_Crp_2
HTH_11
HTH_Cmi2_C
MarR
FUR
HTH_28
Dimerisation
E2F_TDP
PadR
HTH_69
Motif
Other DBs
NCBI-ProteinID:
ANL12164
LinkDB
All DBs
Position
pRspN1341b:110092..110871
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AA seq
259 aa
AA seq
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MNEPKHGSPVVEKTAHLLEAVADAKTGISLGALVDQLRVPRSTVYRILNSLTAHGLVARV
NGGASYELGPKFVELARRISPGADRVTLIEAARPILAAAAERVMESFKLAVPEGREMMTI
FAASSPGDYALFIKVGGRSRKHVGAAGKLALAYSDYSETEAYCAGGLEAKTPYTITDPEA
LKEALVEIRRNGYAEDNQESNLGLRAFAAPVFDDQSRLIATVSVPFIGEATPDRARSIRR
EVLEAAATLTKTINGLHPK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccgaagcatggttctccagtggtggaaaagacggcgcatctgcttgaggcg
gtggccgatgcgaaaacgggaatttcccttggggcattggtcgatcagctgcgcgtgcct
cgctcgacggtctatcgcattttgaattcgctgaccgcgcatggcctggtcgcgcgggtc
aatggcggagcctcctacgaactcgggccgaaattcgtcgagcttgcccggcggatatcg
cccggcgccgatcgggtgacgctgattgaggcggcaaggccaatcctggcggcggcggcg
gagcgggtaatggaatcctttaagctggccgtgcccgagggacgtgagatgatgacgata
tttgccgcttcgagtcccggcgattatgctttgtttatcaaggtcggcgggcgttcgcgc
aagcacgtcggagccgcaggcaagcttgctctggcctattcggactatagtgaaaccgaa
gcctactgcgccggcgggctggaggccaagacgccctatacgatcaccgatccggaggcg
ctgaaagaggcgctggtggaaattcgccgcaacggctatgctgaagacaatcaggaatcc
aacctcggcttgcgcgccttcgccgcgccggtattcgatgatcaaagtcgtctgatcgcc
accgtcagcgtgccgttcattggagaggcaacaccggatcgggctcggtcgatccggcgc
gaggtcttggaggcggctgcgacgctgacgaaaaccatcaatgggctccatccaaaataa
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