Rhizobium sp. N1341: AMJ98_PB00198
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Entry
AMJ98_PB00198 CDS
T04420
Name
(GenBank) LacI family transcriptional regulator protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhn03000
]
AMJ98_PB00198
Transcription factors [BR:
rhn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AMJ98_PB00198
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_Tnp_ISL3
HTH_23
Sigma70_r4
HTH_Crp_2
TetR_N
HTH_31
HTH_AraC
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ANL12259
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Position
pRspN1341b:206984..208054
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AA seq
356 aa
AA seq
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MKNEDEPKDKRLKGGDAQKLTMAEVAKYVGVSAMTVSRAFRQDASVSEETRKRIMEAVDA
LGYVLDLSAGSLSSRRSGFIAALVPSINNSNFSDTARGITDALENTGLQLLLGYTDYAAE
KEEKLIEAMLRRRPEGIILTGGSHTDRARRMLDKAGIPVVETWELPEEPINHVVGFSNSE
AMSLLVRTLASQGYRRFGYIGGTTARDTRGSQRRSGFLKTVEELGLGPGRAISFGVPPIT
MEQGGQAIVSLLERWPDTEVVLCVSDLSAFGAIMECKRRGMRVPEDIAIAGFGDYEISSI
CHPSITTINVDCYGIGRQAAVRLLDALQAGSETTGDEITLTSYRVVLRESTDRGIR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacgaggatgagccaaaagacaagcgcctcaagggaggagacgcccaaaagctg
acgatggctgaggtcgccaaatatgtcggcgtatcggccatgaccgtttcgcgcgccttt
cgccaggatgcgagcgtttccgaagagacgcgcaagcgcatcatggaagcggtcgatgcg
ctcggctacgtgctcgacctatccgccggcagcctttcctcgcggcgcagcggcttcatc
gcggcgctggtgccctctatcaacaattcgaatttctccgacaccgcgcgcggcatcacc
gacgcgctggagaataccggccttcagcttctgctcggttataccgactatgccgctgag
aaagaggaaaagctgatcgaggcgatgctgcgccggcgtcccgagggcatcatcctgacg
ggcggctcgcataccgaccgggcgcggcgcatgcttgataaggccggcattccggtggtg
gaaacctgggagcttccggaagagccgatcaatcatgtcgtcggcttttccaacagcgag
gcgatgtcgctgctggtgcggacacttgccagtcagggctatcgcaggttcggttatatc
ggcggaacgacggcgcgcgatacacgcggcagccagcggcgcagcggtttcctgaagact
gtcgaagaactgggcctgggaccgggccgggcgatttccttcggcgtgccgccgatcacc
atggaacagggcggccaggcaatcgtcagtctgttggagcgctggccggacacggaagtc
gttctctgcgtttccgacctgtccgccttcggcgcgatcatggagtgcaagcgcaggggg
atgcgtgtgcctgaagatatcgccattgccggtttcggcgattacgagatctcgtcgatc
tgtcatcccagcatcaccacgatcaatgtcgactgttacggcatcggccgccaggccgcc
gtccgcctgctggacgccctgcaggcgggcagcgagacaaccggcgacgagatcacattg
accagctacagggtcgtcctgcgcgaaagcacggatcgcggcatccgatag
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