Rhizobium sp. N1341: AMJ98_PC00071
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Entry
AMJ98_PC00071 CDS
T04420
Symbol
dapF-2
Name
(GenBank) diaminopimelate epimerase 2
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00300
Lysine biosynthesis
rhn00470
D-Amino acid metabolism
rhn01100
Metabolic pathways
rhn01110
Biosynthesis of secondary metabolites
rhn01120
Microbial metabolism in diverse environments
rhn01230
Biosynthesis of amino acids
Module
rhn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMJ98_PC00071 (dapF-2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMJ98_PC00071 (dapF-2)
Enzymes [BR:
rhn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AMJ98_PC00071 (dapF-2)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CbiD
Motif
Other DBs
NCBI-ProteinID:
ANL12435
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All DBs
Position
pRspN1341c:77209..78102
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AA seq
297 aa
AA seq
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MRHINFLSCPPPVDLPGQWPFIKMHGLHNYFVIVDRRDGSKSFDREDIVRICDCHTGPGG
EQLLTIEPASDKGRNVGAYAAMRIFNIDGKEVGACGNATRCIAYLLLEETGEDEVQIETK
AGVLHCRRAGPMQISVTFGPISMDWRRIPLSREVDTLHLPVQSGPLKDGLALDIGNPHAV
FFVDCLELFDMAHHAPVVQNDPLFPEGINVDAAEVLDGRTLRLAVWERPGILTKACGTGA
CVAAYAALKRGLVTSTRIAVHLPAGLLKIEIANGDMAVMTGPVAFCCHGFIEGGKKS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagacacatcaactttctctcatgccctccaccagttgacttgcccgggcagtggcca
tttatcaagatgcacggcttacacaactattttgtgatcgtagatcggcgcgacgggtcg
aagtctttcgatcgtgaggacatcgtccgcatctgcgattgccacaccggtccgggaggc
gagcaactgctcaccatcgaaccggcctcggacaaggggcgcaacgtcggtgcctacgcg
gcgatgagaatctttaacatagacggcaaggaagtcggtgcatgcggcaatgccacgcgc
tgcattgcgtatcttcttctcgaggagaccggcgaggacgaggtgcaaattgaaacgaaa
gcaggtgtccttcactgtcgaagagcagggccaatgcaaatcagcgtcacgtttgggcca
atcagcatggactggcgcaggattcccctgtccagagaggtagatacgcttcacttgcca
gtacaaagcggaccactgaaggacggcctcgcgctcgatataggcaacccgcacgctgtc
ttcttcgtcgattgcctcgaactctttgacatggctcaccatgcgccggtggtgcagaac
gaccccctctttcccgagggcattaatgtggacgccgccgaggttctggacgggcggaca
ctgcggctcgccgtctgggagcgtccgggcatattgaccaaggcatgcggaaccggcgca
tgcgtcgccgcctatgcggcactgaaacgaggcctcgtcacttccaccagaattgcggtc
caccttccggccggattgctgaaaatcgagatcgcaaacggagacatggctgtcatgacc
gggcctgtcgcgttctgctgtcatggctttatagaaggaggcaagaagtcgtag
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