KEGG   Rhizobium sp. N1341: AMJ98_PC00223
Entry
AMJ98_PC00223     CDS       T04420                                 
Name
(GenBank) type VI secretion system Rhs element Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AMJ98_PC00223
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhn02044]
    AMJ98_PC00223
Secretion system [BR:rhn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AMJ98_PC00223
SSDB
Motif
Pfam: Phage_GPD Phage_base_V Gp5_trimer_C DUF6484
Other DBs
NCBI-ProteinID: ANL12586
LinkDB
Position
pRspN1341c:complement(240514..242541)
AA seq 675 aa
MVESRIESLLRHNRFVAVTSAASELNEISLRRLSGTERLGEPFLYEVKLASRNPVQNFAT
IPGQNLTIGLKLKDSQTRFFNGVVTRFQYLGLDDTEHLNYVAQVRPWISLLEHRSNSRVF
QNKTSIEIITTIFREHKGNFKNQTARRFPQRPYCVQYDETDLAFVSRLMEQDGIYYYFEH
AEDQHDLVLVDNAASHMACTPEIVETHHNLRPARSLYQEDVILHWDEVVSLQPNKVVLRD
YDHEKPMAELTSVARVPPVRTGGIPPCKLTGSAITRPRESVAVRTGETSSASSGCTAMRE
VFEYPGQYTKKSDGDFYATIRAEELACNAYRARIESTARQITTGSLFKAANPFYYGQVGS
RPKPTDRFLAVGQDFTVIGEVGDDLTADTVGGKGERFLYHSNVEIIPATTQYRPRRRTPA
RLIHGPQTAVVVGPEGESIATDKYGRVKVQFFWDREGGKNENSSCWIRVAQNFAGKGFGN
LVVPRIGHEVVVDFIHGNPDTPLVTGVVYNGSNLPPETLPTDKTRSTFRTHTDGGAANAY
NELRFEDKQGREEVYLKAQKNHTVEVGNIYSIDVKRHFLLTSGGAAPDSPAAAALGSRVE
VTPDKIRLVVSGRTGPQAIEISGDGIAIIGTMIGVMATPPRLGSIVSMPPPTPGPPTPSI
MKLIATLGLPPVTPE
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggtcgagtcaagaatcgagagtctcttaaggcacaatcgttttgttgcggtcacttcg
gccgcgtccgagttgaatgaaatctctctccggcggctcagtggcaccgagcggctgggg
gaacctttcctctacgaggtgaagctcgccagccgcaatccagttcagaactttgctacg
atccccggtcaaaacctgacaatcggccttaagctcaaggactcgcaaacccgcttcttc
aacggtgttgttacgcgcttccaatatctcggcctcgacgataccgagcacctcaactac
gtggcgcaggtgcggccgtggatttcattgctcgagcatcgctctaacagtcgggtcttt
cagaacaagacgagcatcgagatcatcaccacgatttttcgagaacataaaggcaatttc
aagaatcagaccgcccgacggttcccacagcgcccatattgcgtccagtacgatgaaacg
gatctggccttcgtcagccgcctcatggagcaggacggcatctactactattttgaacat
gctgaggaccaacatgacctggtgctggtcgacaacgccgcgagtcacatggcctgcacg
cctgagatcgtagagacccaccacaatctcaggcctgcccgaagtctttaccaagaagat
gtcatcctgcattgggacgaggtcgtatcgctacagccgaacaaggtcgttctcagggac
tatgaccatgagaagccgatggcagaactgacgtctgtcgcgcgtgttcctcccgtgagg
acaggcggcattccgccatgcaagctcacgggaagcgccatcacccgaccgcgggagagc
gtggcggtcagaacgggcgagacctcgtcggcaagcagcggctgcacggcaatgcgggag
gtcttcgagtatccaggccagtatacaaaaaaaagcgatggtgatttctacgccaccatc
cgtgccgaggaactcgcctgcaacgcttatcgcgcgcggatcgaaagcactgcgcgccag
ataacgaccgggtcattattcaaggcggcaaatcccttctactacggccaggtcggttcc
cgcccgaaacccaccgatcgctttctggcagtcggacaggacttcactgtcatcggtgag
gtgggggacgatctcactgcggacaccgtgggggggaagggcgagcggttcctctatcac
agcaacgtagagattatccccgcgaccacccagtaccgaccgaggcgccgcacaccggcg
cggttgattcacggaccgcagacggccgtcgtcgtgggccccgagggcgagtcaatcgcg
acggataagtacggccgtgtgaaggttcagttcttctgggaccgagaaggcggaaagaac
gagaacagctcctgctggattcgggtggcccagaacttcgctggtaagggttttggcaac
ctggtcgtcccacggatcggccatgaggtcgtggttgatttcatccacggcaatcccgac
acgcccctggtgaccggcgtcgtatacaatggctcaaatctgccgcctgaaaccctgccg
accgacaaaacgcggtcgaccttccggacgcataccgatggcggcgccgctaatgcctac
aatgaactgcgctttgaggacaagcagggccgtgaggaggtctatttgaaggcccagaag
aatcataccgtcgaggtcgggaatatctacagcatcgacgtcaagagacacttcctcctg
acctcgggcggcgccgcgcccgactcccctgccgcagcggccttaggtagccgcgtcgag
gtaacacccgacaagatccgccttgtagtatcgggcagaaccggcccgcaggccatcgaa
atcagcggcgatgggatcgccattatcggcacgatgattggcgttatggcaacgcctccg
cggctcgggtccatcgtctccatgccgccgccgacaccgggtccacccacgccgtcgata
atgaagcttattgcgacactcgggctgccgcctgttacgcccgagtga

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