Rhizobium sp. N1341: AMJ98_PC00240
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Entry
AMJ98_PC00240 CDS
T04420
Symbol
syrM
Name
(GenBank) transcriptional regulator protein SyrM
KO
K25882
LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhn03000
]
AMJ98_PC00240 (syrM)
Transcription factors [BR:
rhn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AMJ98_PC00240 (syrM)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ANL12603
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Position
pRspN1341c:268090..269091
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AA seq
333 aa
AA seq
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MKRYVEKEVTDQLAYRRKMLQDWRGERLTGHQINLASIDLNLLVALEALLEYRNVTHAGQ
HIGRSQPAMSRALGRLRGMFNDDLLVRSSTGLIPTPQGEHLAQRLPSALRTIREMVTSRS
VISKEWGRGATLAIPDHQALAVLPRLLPWLRERAPHLDTLACLPFDRAVRGLEQGDIDLA
VGHIDVQLPGYFRRSLYTDRFACLLRHDHPALAQEWTIDNFATLRHAAISTDSPDHFGPI
YDHLPNLREDRSPILFSSVLTAAVVASGTDLVLLVPRRVATQVSAMLPLRVVDPPLEPAP
YKVMLIWHERCHHDPQHKWLRKEVAAALETGAD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctatgtagaaaaagaggtgacggatcaactcgcttataggcgaaagatgttg
caagattggagaggagagcgcctcactggacaccagataaacttggcatcaatagacctc
aacctcctggtcgcgctcgaggctctgctcgaataccggaacgtgacgcacgcgggccag
cacatcgggcggagtcaaccggcgatgagccgggcactgggaaggctgcgcggcatgttc
aatgatgacctgctggtgcggtcttcaacgggtttgatcccaacgccgcaaggcgaacac
ttggctcaaaggctgccgtcggcactgcgtacgatccgagagatggtgacaagccgcagc
gtaatctcaaaagaatgggggaggggggcaacgctggcgatccccgatcatcaagctttg
gctgtactaccgcgcctcctgccgtggttacgcgagcgtgcccctcatctcgacacactc
gcctgtttgccgtttgatcgtgccgtgcgggggcttgagcaaggtgatattgatttggcc
gttgggcatattgacgtgcaactgcctggctattttcggcgcagtctctatacagaccgc
ttcgcgtgtttgttgcgccacgaccatcccgcgctggcgcaggaatggacgatcgacaac
ttcgcgaccttgcgtcacgctgccatcagtacggactcccccgaccatttcggcccgatc
tacgaccacttgcccaacctgcgagaggatcgtagtcccatacttttttccagcgttctc
acggcagcggtggtggcttcggggacggatttggtattgctcgtcccgcgccgcgttgcg
acccaagtttccgcgatgctgccgcttagggttgttgatccacccctcgagccggcaccg
tacaaggtcatgctcatctggcacgagcggtgccatcacgacccgcagcataaatggctg
cgcaaggaggtcgccgcagcgttggagacgggagcagactga
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