Rhizobium sp. N1341: AMJ98_PC00297
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Entry
AMJ98_PC00297 CDS
T04420
Symbol
ctrE
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00900
Terpenoid backbone biosynthesis
rhn01100
Metabolic pathways
rhn01110
Biosynthesis of secondary metabolites
Module
rhn_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AMJ98_PC00297 (ctrE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rhn01006
]
AMJ98_PC00297 (ctrE)
Enzymes [BR:
rhn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
AMJ98_PC00297 (ctrE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
AMJ98_PC00297 (ctrE)
2.5.1.29 geranylgeranyl diphosphate synthase
AMJ98_PC00297 (ctrE)
Prenyltransferases [BR:
rhn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
AMJ98_PC00297 (ctrE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ANL12659
LinkDB
All DBs
Position
pRspN1341c:330087..331016
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AA seq
309 aa
AA seq
DB search
MISNHQADVVGDSDKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKV
SYVCGEKDPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTG
DALIVMAFKYLSLQAALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHVPIDRYHHYK
TGSLFVAAATCGALASGADPAPWSKVGELLGHAYQIADDIADTVGRAEVLGKLPAVDTQL
NRPSIVRGQGLDSAAARFYAYLEQIGDTIPASPQKRSFVDWLNHALCKGVAGPGKAGLIQ
QTALDCAPL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgaatcaccaagccgacgtggttggcgatagcgacaagctcatcgagcaagcg
ctgcgagctgccatggatactgctctaagtccggctgcgccggctcacctgcgtggagcg
ctggacgcggcagtgtttccagggggctcccggatgcgccccaagctctgcttgaaagtc
tcctatgtgtgcggcgaaaaagatcctgagctggcgacaagagccgcggcagcaattgaa
ttgctgcactgtgcctcgttggtgcatgacgacttgccttgcttcgataacgcggcgcta
cgccgcggcagaccaacggtgcaccggcttttcggagagcctatcgccgttttgaccggc
gatgccttgattgtgatggctttcaaatacctcagcttgcaggctgcgctaacacctgag
ttgggcgcgcgcatgatcgaggtggttgcggaggcggtcggccccagtcacggactgatc
gccggacagtcgatggaggcaatgacgcacgtcccaatcgaccgctatcaccattacaag
accggctccctctttgtcgcggcggccacttgcggtgccctggcaagtggtgcagatccg
gccccatggtctaaggtgggggaattgctcgggcacgcgtatcagatcgccgacgacatc
gcagatacagtcggccgcgcagaagtgcttggcaaattgcctgccgtggacacgcagctg
aatcgacccagtatcgttcgcggccaaggattggacagcgcagccgccagattttatgcg
tatctcgaacagataggtgacaccattcctgccagccctcaaaaacggtccttcgttgac
tggcttaatcatgcactttgcaaaggcgtggctggaccgggaaaagccggtctgattcaa
caaacggcgctggattgcgcgcctttgtaa
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