Rhizobium sp. N1341: AMJ98_PD00068
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Entry
AMJ98_PD00068 CDS
T04420
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00362
Benzoate degradation
rhn01100
Metabolic pathways
rhn01120
Microbial metabolism in diverse environments
rhn01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMJ98_PD00068 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
AMJ98_PD00068 (pcaH)
Enzymes [BR:
rhn01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
AMJ98_PD00068 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Motif
Other DBs
NCBI-ProteinID:
ANL12826
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Position
pRspN1341d:complement(81709..82458)
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AA seq
249 aa
AA seq
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MSERANSKPETGAFFARDRAWHAPALTPGYKTSVLRAPQRALLSLDGTISETTGPVFGHS
IIGELDNDLILNYARPGESAIGERIIVHGRVLDERAKPVAGALVEFWQANAGGRYRHKKE
TYLAAIDPNFGGCGRAITDEEGRYHFRTVRPGAYPWPNGVNDWRPAHIHFSIFGHGFAQR
LITQMYFEGDPMIWKCPIVGTIPDKAAIEQLIAPLDWGNTIPMDSRAYKFDIVLRGRRST
MFENTLEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgagcaaacagcaagccggagaccggcgccttcttcgcccgcgaccgcgcc
tggcacgcgccggcgctgaccccaggctacaaaacctcggtgctgcgcgcgccgcagcgc
gcgctgctgtcgctcgacggcacgatctccgagacgacaggtccggtcttcggccattct
atcatcggcgaactcgacaacgacctgatcctgaactatgcgcgccccggcgaaagcgcc
atcggcgagcgcatcatcgtccacggccgcgtgctcgacgagcgggcaaagccggttgcc
ggcgccctggtggaattctggcaggccaatgccggcggccgctatcgccacaagaaggaa
acctatctcgcggcgatcgatccgaatttcggcggctgcggccgcgccatcaccgatgag
gagggccgctaccatttccgcaccgtgcgacccggcgcctatccctggccgaacggcgtc
aacgactggcgccccgcccatatccacttctcgatcttcggccacggctttgcccagcgg
ctgatcacccagatgtatttcgagggcgatccgatgatctggaaatgtccgatcgtcggc
acgatcccggacaaggcggcgatcgagcagctgatcgcaccgctcgattggggcaacacc
attccgatggattcacgcgcctataaattcgatatcgtgctgcgcggccgccgctcgacg
atgttcgaaaacacgctggagggcaactga
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