KEGG   Rhizobium sp. N1341: AMJ98_PD00177
Entry
AMJ98_PD00177     CDS       T04420                                 
Name
(GenBank) type II secretion system E protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AMJ98_PD00177
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhn02044]
    AMJ98_PD00177
   02035 Bacterial motility proteins [BR:rhn02035]
    AMJ98_PD00177
Enzymes [BR:rhn01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     AMJ98_PD00177
Secretion system [BR:rhn02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   AMJ98_PD00177
Bacterial motility proteins [BR:rhn02035]
 Pilus system
  Pilus assembly proteins
   AMJ98_PD00177
SSDB
Motif
Pfam: T2SSE nSTAND3 AAA_16 AAA_28 AAA_30 nSTAND_NTPase5 AAA_19 ABC_ATPase ResIII AAA_7 cobW DEAD TrwB_AAD_bind Zeta_toxin AAA_29 AAA_22 ABC_tran CbiA AAA_2 AAA_23 AAA_6 HerA_C FtsK_SpoIIIE DAP3 AAA_18 AAA_SelU Sigma54_activat RsgA_GTPase AAA KTI12 AAA_14 AAA_5 ORC-CDC6-like SLFN-g3_helicase NACHT Mg_chelatase VapE-like_dom RNA_helicase Septin SRPRB ATP_bind_1 KAP_NTPase TsaE
Other DBs
NCBI-ProteinID: ANL12935
LinkDB
Position
pRspN1341d:197740..198885
AA seq 381 aa
MKAVSDDAAEQATFQVLTRALDKLLAPIRFLLEDPSVSEILINGTSDIFVERRGKLERAD
TRFASREDLESAARSIAQFSGKRLTPEEPSVEARLPDGSRVQMIQPPAARTGLCISIRRF
LREHRSIRDLVTQCSLTEESLSLLQAAVGLQKNVIISGGTGTGKTTMLNALSEAFADHER
VIVIEDTSELQIRKEHVVYLEVTKPDRFGRGGASIRELFRSSLRMRPDRIIVGECRGGEA
LDMIQAMTSGHSGSLSTVHANTPYDALHRLETLALMSDIDMPLRPLRSQIASAVDVVVQI
ARFKRTGRRRVIEISEIKGLNEDGQYIVESIYKLDGGGHSNADGELRWTGAVPSFATEAL
EELGSSQMELPSWMKPVAASR
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaaagccgtttccgacgacgctgccgaacaggcgaccttccaggttctgacccgggcg
ctggacaagctcctggcgccgatccgcttcctgctcgaggatccgagcgtttccgaaatc
ctgatcaacggaacctccgatatcttcgtcgaaaggcgcggcaagctcgaacgcgccgat
acgcgcttcgccagccgcgaggatctggaatcggcggcgcgcagcatcgcgcaattctca
ggcaagcgcctgacgccggaagaaccgagcgtcgaagcccgtctgccggacggttcgcgc
gtgcagatgatccagccgccggccgcccgcaccgggctctgcatttccatccgccgcttt
ctgagagaacatcgcagcattcgcgacctcgtcacccaatgcagcctgacggaggagtcg
ctgtccttgctgcaggcggcggtcgggctgcagaagaatgtgatcatctcgggcggcacc
ggcaccggcaagacgacgatgctgaacgcgctatcggaagccttcgccgatcatgagcgg
gtcatcgtcatcgaggacacgtcggaactgcagatccgcaaggagcacgtcgtttatctc
gaagtcaccaagcccgacaggttcggtcgcggcggcgccagcattcgcgagctgttccgc
tcttccctgcgaatgcggccggaccgcatcatcgtcggcgagtgccgcggcggcgaagcg
ctcgatatgatccaggcgatgacatcgggccatagcggcagcctttcgaccgtgcatgcc
aatacgccctacgacgcactgcaccggctggagaccctggcgctgatgtcggatatcgac
atgccgctgcggccgctgcgctcacagatcgcttccgccgtcgacgtcgtcgtccagatt
gcccggttcaagcgcaccggtcggcgacgggtcatcgaaatttccgagatcaagggcctc
aatgaggacggccagtatatcgtcgagagcatctacaagctcgatggcggcggccattcc
aacgcggatggcgaactgcgctggacaggcgccgtgccgagcttcgccacggaagccctt
gaggagttggggagcagccaaatggagctcccgagttggatgaagccggtcgcggcttcg
cgttag

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