Rhizobium sp. N1341: AMJ98_PD00215
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Entry
AMJ98_PD00215 CDS
T04420
Symbol
glgX-2
Name
(GenBank) glycogen debranching enzyme GlgX 2
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00500
Starch and sucrose metabolism
rhn01100
Metabolic pathways
rhn01110
Biosynthesis of secondary metabolites
Module
rhn_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
AMJ98_PD00215 (glgX-2)
Enzymes [BR:
rhn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
AMJ98_PD00215 (glgX-2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
ANL12973
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All DBs
Position
pRspN1341d:242807..244963
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AA seq
718 aa
AA seq
DB search
MSFSFSELDFLKPELGAEYTGSGTHFAVFSAHAEQIELCLFSPDGKDEIARLPLPKREGD
IWSGYIAGIGPGTVYGYRAHGPYDPGAGHRFNPNKLLLDPYAKQVTGELEWHDALFGYRI
GEDDLSFDDRDSAPFMVKGVVQDPDFDWAGEEAIRRPWPDTIIYEAHVRGLTMTHPKVPD
RLRGTFLGMCSDPIIDHLVGLGVSAIELLPIQYFLDDRYLLEKNLRNYWGYQTLGFFAPQ
ARYLSSDKITEIKTMVKKFHAVGIEVIMDVVYNHTAEGSEKGPTLSFRGLDNASYYILSP
DDPRHTFDTTGTGNTLNVANPMVMRMVLDSLRYWVGVMHIDGFRFDLASTLGRQDLEFDR
QGLFFGAIRQDPILAGVKLIAEPWDIGAGGYQVGGFPHPFREWNDKFRDDVRRFWKGDGG
MVSELAARITGSAPQFNHSDRGATSSINLLSAHDGFTLMDTVSFDGKHNEANGEDNRDGH
SDNHSDNMGAEGATDNPDINAARARRRRNMMATLMLSQGVPMILAGDELGNSQGGNNNAY
CQDNEIGWTGWDGLDDPFLDFCRRAAAFRKAHPVLRQERFLTGEISEDGRIEIAWYKPDG
SFMDDGAWNDEGLQVLGLYLSKSAHALDTENMDDLFLVFNAGGDCEVHLPEVNGLTQWSR
VLDTGAETGAFEVHDQDNPVIVYTQSLAVFAPTGQTQPPEGATKAQRRRWFQFGRRSK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttccttttcggaactcgacttcctcaagccggagctgggggcggagtatacg
ggttccggtactcatttcgccgtcttctcggcgcatgcggaacagatcgagctctgcctg
ttttcccctgacggaaaagatgagattgcccggctgcccttgcccaaacgcgagggcgac
atctggtcgggctatatagccggcatcggaccgggcaccgtatacggctatcgcgcccat
ggcccctatgatcctggtgcgggccaccggttcaatccgaacaagcttctgctcgacccc
tatgccaagcaggtgacgggcgagctggaatggcatgatgcgctgttcggctatcggatc
ggcgaggacgatctttccttcgacgaccgcgacagcgcgcccttcatggtcaagggcgtc
gtgcaggatcccgatttcgactgggcgggtgaagaggcgatccggcggccctggccggat
accatcatctacgaggcgcatgtgcgcggcctgacgatgacgcatccgaaagtgcccgac
cggctgcgcggcacctttctcggcatgtgcagcgatccgatcatcgatcatctcgtcgga
cttggcgtctcggcgatcgagctcctgccgatccaatatttcctcgacgaccgctatctc
ctcgaaaagaatctgaggaattattggggttatcagacgctcggtttcttcgcgccgcag
gcgcgctatctctcaagtgacaagatcaccgaaatcaagaccatggtgaagaagttccat
gccgtcggcatcgaggtcatcatggacgtggtctacaaccacacggccgaaggcagcgag
aaggggccgacgctgtctttccgagggctcgacaatgcgagctattacatcctctctccc
gacgatccccgccacaccttcgatacgaccgggaccggcaacacgctcaacgttgccaat
ccgatggtgatgcgcatggtgctcgacagcttgcgctactgggttggggtcatgcatatc
gacggcttccgcttcgatcttgccagcacgctcgggcgccaggatctggagttcgaccgt
cagggcctgttcttcggtgctatccgtcaggatccgatcctggccggcgtcaagctgatc
gccgagccctgggatatcggcgcgggcggctatcaggtcggcggtttcccgcaccctttc
cgcgagtggaacgacaagttccgcgacgacgtgcgccgcttctggaagggcgacggcggc
atggtgtcggagctggcggcgcgcatcaccggctcggcgccgcaattcaatcattccgat
cggggcgcgacctcctcgatcaatcttctgtcggcccatgacggcttcacgctcatggat
acggtgtccttcgacggcaagcacaacgaggcgaacggggaggataaccgggacggccat
tcggacaatcattccgataatatgggcgccgagggcgccaccgataatcccgacatcaac
gcggcccgcgcccgccggcggcgcaacatgatggcgacgctgatgctctcccaaggcgtg
ccgatgatcctggccggcgacgaacttggcaacagccagggcggcaacaacaacgcttat
tgccaggacaatgagatcggctggacaggctgggacgggctcgacgatcccttcctcgat
ttctgtcggcgggcggcagccttccgcaaggctcatccagtcctccggcaggagcggttc
ctgaccggcgagatcagcgaggacgggcgcatcgagatcgcctggtacaagcccgacggc
agcttcatggacgacggggcctggaacgatgaaggattgcaggtgctcggcctctacctc
tcgaagagcgcgcatgcgctggataccgaaaacatggatgaccttttcctcgtcttcaac
gccggcggcgactgcgaggtccatctgcctgaggtgaacggactgacgcagtggtcacgg
gttctcgacaccggggcggagaccggcgccttcgaggtgcacgatcaggacaatccggtc
attgtctacacccaaagcctggccgtctttgcaccgacaggccagacgcaaccgccggag
ggggcgaccaaggcccagcgccgccgatggtttcagttcggccgcaggagcaaatag
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