Rhizobium sp. N1341: AMJ98_PE00115
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Entry
AMJ98_PE00115 CDS
T04420
Symbol
lpsB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00541
Biosynthesis of various nucleotide sugars
rhn00552
Teichoic acid biosynthesis
rhn01100
Metabolic pathways
rhn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AMJ98_PE00115 (lpsB2)
00552 Teichoic acid biosynthesis
AMJ98_PE00115 (lpsB2)
Enzymes [BR:
rhn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
AMJ98_PE00115 (lpsB2)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
adh_short
KR
CoA_binding
PglD_N
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
ANL13340
LinkDB
All DBs
Position
pRspN1341e:110157..112160
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AA seq
667 aa
AA seq
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MPMQALVAPLLAMPRAAKRALALLVDSGLCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSL
CMALPIFIVMGMYRAIFRYANMAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQP
FLLLIAIGLSRLGIRYWLGDTYQRILHQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVG
YLDDDPRLKGGIMGGLPIYDPSDLPVLAEALGVHNVLLALPSASRQRRNEILEHIRKARV
NVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAGGSI
GGELCRQILRNAPSSLILIDQNEFALYNIHAELLKLAEVYKHESLQIVPILCSVRDQDRM
EHIMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKCGVSNFVLISTD
KAVRPTNVMGASKRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQQIK
DGGPVTLTHPKITRYFMTISEASQLVIQAGAMADGGDVFLLDMGEPVRIADLARKMVELS
GLTVRDIDNPEGDIELAVTGLRPGEKLYEELLIGDNPETTEHPRIMKAREDFLSWAELSK
KLNSLNASLDRNDMVAARATLAELVSGYSSTGEVSDLAFTGAETNPAHEDVNALASAAGN
QLRTTGA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatgcaggcgctcgtcgcccctctgctggccatgccgcgtgctgccaaacgcgcg
ctcgccttgctggtggattccggtctttgcgtcctgacgatctggctggcttattgcttc
cgtctaaacgaatggacggtgctaaccggcgtgcagtggttgccggtcttcgtctccttg
tgcatggcgcttcccatcttcatcgtcatgggcatgtatcgggcgatcttccgttatgcc
aacatggccgctttcattgccgttctaaaagcaattgcgatctacggcgtcgccttcatg
acgatatttacggcgctgagcgtcccgggcgttccgagaaccgtcggcattctccagccc
ttcctgctgctgattgcgatcggcctgtcacggttgggcatccgttattggctcggggat
acctatcagcgtattcttcaccagaatacgctcgccaaggtgttgatctatggggcggga
aatgccggacggcaactcgccggcgctctgacgaacagcgccgaactcaatgtcgtcggc
tacctcgatgatgatccgcgccttaagggcggcatcatgggtggtttgccgatctatgac
ccgtcggatcttccggtgctcgccgaagcacttggcgtgcacaacgtgcttcttgctctt
ccatccgcatcgcgacagcgtcgcaatgaaattctcgagcatatccgcaaagccagggtg
aacgtccggacattgccggatctcacggcgctggctcagggacgagtcgcggtctccgat
attcgtgagctggagatcgaagacctgctgggtagggaagcggttgcgccacggcaagag
ctgctcgacaaggcgatgcgcaacaaggtggtgatggtcacgggcgccggcggctctatc
ggcggcgagttatgtcgccagattctgcgcaacgcgccttcgagcctcatcctcatagat
cagaacgagtttgcgctttataatattcatgccgaattgctgaagctggccgaagtttac
aagcatgagagcctgcagatcgtgccgatcctttgttccgtccgcgaccaggatcgcatg
gaacatatcatgcaaagctggcggcctcagacgctttatcacgctgctgcttacaagcat
gtgcctctcgtcgaacacaacgccgtggaaggcatcaagaacaatgtcatggggacattg
atcaccgcacgtgcggcaaataaatgcggcgtctcgaatttcgtgctgatcagcacggac
aaagccgtgcgcccgacgaatgtgatgggcgccagcaagaggctggccgagatggtgctg
caggcgcttgcggcagagctgaccgctgacagattgcggacgaacttctcgatggtccgc
ttcggaaatgtcctcggttcctccggatccgtcgtgccgctgttccggcagcagatcaag
gacggcggcccggttaccctgacgcatccgaaaataacccgctacttcatgactatttcg
gaagcctcgcaacttgtcattcaagcgggcgccatggccgacggcggcgatgttttcctg
ctcgatatgggcgagcccgtccgcattgccgatctcgcccgcaagatggtcgaactgtcc
ggattgaccgtccgggacattgataatccagaaggggacatcgagcttgccgttaccggc
ctgaggcccggtgagaagctttatgaagaactgttgatcggggataaccccgagacaact
gaacatccgcggattatgaaggcgcgcgaggatttcctgtcctgggcggaactttcaaag
aagctcaattcgctcaatgcgtcattggaccgaaacgacatggtcgcggcacgtgcgact
ttggcagaactcgtttccggctattcctcgacgggcgaggtttccgatcttgcatttacc
ggcgccgaaaccaatccggcgcatgaagatgtcaacgcgctagcctcagccgcaggaaat
cagcttcgaacgacaggtgcataa
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