Rhodococcus sp. NyZ502: ACBG85_04250
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Entry
ACBG85_04250 CDS
T11460
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhny Rhodococcus sp. NyZ502
Pathway
rhny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACBG85_04250 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhny03400
]
ACBG85_04250 (recC)
Enzymes [BR:
rhny01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACBG85_04250 (recC)
DNA repair and recombination proteins [BR:
rhny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACBG85_04250 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XEU10435
LinkDB
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Position
898911..902192
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AA seq
1093 aa
AA seq
DB search
MLKLYRAERSDTLVSALATLLRTPLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPSA
VDGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVLA
KHLEGHREGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSEDFEWQARLW
CIVADKIDVPGPAERLGQVSRALVEDPALVDLPERLSVFGPTRLPVDQRMILSALSANRD
VHIWLPHPSPALWTKMSSRIPPRSESTIRRSEDGSALISANPLLSSLARDVRELQISLGA
AEFESVHLPEPAGPKSLLATVKADVIADRAPRVAAEPDGTVQVHACHGPARQVEVLRECL
LRLFEDDPTLQPRDVLVMCPDVETYAPLVRAAFGQGVHGHPGHLLRVRLADRGLRQTNPV
LAVLGSLLELADGRATASEVLDLAATEPVRTRFSWGDDELERLREWTTEAGARWGIGSRQ
RATFGLDAFPQNTFNTAMDRILLGVSADESENAWLDLALPLDDVDGTDIDLTGRFAEFVD
RLAVSLRDLAGPHSPAEWLRVLMRALDLLTDTAPADSWQSAGAHRELVAAVEFGGETVLR
LADVRAMLSRSLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLIGLDDEVFPRTGGVDG
DDILSRDPVVGERDLRSEDRQLLLDAVMSAGEHLILLYTGADPVTGVVRPPAIPLSGLLD
VLSATVGPDAVNGVLTRHPLQSFDNRNFAPNKPFSFDTAALAGARAASGTPVELPTVLSA
ELPEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVPELDDDIADSLATELDPLSTWALGD
RMLLSRLAGRSSADFRAAEWRRGTLPPYNLGATVLGNVEWVVDQLAGLALPHLEGDSEAV
DVDIDLGDGRRLTGTVTGVHGDSVVRASYSSLAPKHRMTAWINLLALKAHGRPGALDAVS
IGRGRGKIAAARSVLDAPGNAVEILQQLVDLRERGLQRPLPMWAATSAEYARRRFGGESV
DDATNGADTQWTGQYGEMIDPSNAYVFGEARTLAELAADPPSDDEFVWAEEPTRFGVLAR
RLWDPLLTNERAE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaagttgtaccgggccgagcgttcggacaccttggtctcggcgttggccacgctc
ctccgtaccccgctgtcggatccattcgcccgggaaactgttgcggtgccggccaagggc
gtcgagcgttggctcaatcagcggctgtcctcccagctaggcacgtccggaccgtcagca
gtggacggaatttctgcgaacatcgcgtttccgtcacccgcgcgcctggtcgcggagtcc
gtggccgcggtcagtggaatcacggctgacgacgacccatggtcgccgacgcgattggtg
tggacggttctcgatgtgatcgacgagtccctcggcgagccctggtgcggagtcctggcg
aaacatctcgaaggccatcgtgaaggtcgacggtttgcctccgccacacatgtcaccgaa
ctcttccgcagttatgccgcgcaacgcccgcagatgctgatcgactgggccgccgggcgg
ttgaccgacggacacggattggcgctgtcggaggatttcgaatggcaggcacgtctgtgg
tgcatcgtcgcggacaagatcgacgttccggggcccgcagagcgactggggcaagtgagc
cgcgcgctggtcgaggacccggccttggtcgacctaccggaacgtctgtcggtcttcggg
ccgacccggctgccggtcgatcagcgaatgatcttgagcgcactcagtgcgaatcgggac
gtgcacatctggctcccgcatcccagccccgcgctgtggaccaagatgagctcgcgcata
ccgcctcgaagtgagagcacgatccgacgttcggaagacgggtcagcgctgatatccgcc
aatccgttgctgtcgagtcttgctcgcgacgttcgtgaacttcagatcagcctcggtgcc
gccgagttcgagtcggtgcatcttcccgaaccagccggcccgaaatccctcctggcgacg
gtcaaggccgatgtcatcgcagatcgtgctcccagggttgcagcggaaccggatgggaca
gttcaggtccacgcttgccacgggccggcacggcaggtcgaggtgctccgcgaatgtctg
ctccgattgttcgaggacgacccgacattgcagccgcgcgacgtactcgtgatgtgcccg
gacgtcgaaacgtacgcacctttggttcgtgctgcattcgggcaaggcgtccatggccac
ccggggcatctccttcgagtaaggctggcagaccgcggattacgtcagaccaatcctgtc
ctggccgttctcggctctctcctcgaattggccgacggccgggccacagccagtgaggtt
ctcgacctggccgcgaccgagcctgtccgcacacgtttttcgtggggcgacgacgagttg
gaaagactgcgggaatggacgacggaagcgggtgctcgctggggaatcggtagtcggcag
cgtgccacgttcggcctcgatgcatttccgcagaacaccttcaacaccgccatggaccga
atcttgttgggggtcagcgcggacgaatcggaaaatgcctggctggatctcgcgctacca
ctcgatgacgtggacggcacagacatcgacctgactggacgtttcgcagagttcgtcgat
cgcctggccgtctcgcttcgcgatcttgccggcccacattcaccggccgaatggcttcgt
gtgctgatgcgggccctggatctgctgaccgacacagcgcccgcagattcctggcagagc
gcgggggcccaccgcgaactggtagctgctgtcgaattcggcggagagacggtgttacgt
ctggccgatgttcgcgcgatgctctcgcgcagcctcgcgggcagaccgacgcgtgccaac
ttccgaaccggcgaactgacggtgtgcacgatggttccgatgcgttcggtaccgcatcgc
gtggtcgtgctgatcggactcgacgacgaggtgttccctcgaaccggtggagtcgacggc
gacgacatcttgtcacgtgatcccgttgtgggggagcgcgatctgcgcagtgaagaccgg
caactgcttctcgatgccgtgatgtctgcgggcgagcatctgattctgttgtataccggt
gccgatccggtcaccggtgtcgtcagaccaccggcgatccccctcagtggccttctcgac
gtactcagtgcgacggtaggtccggacgctgtgaacggggtgctgacacggcatccgttg
caatcgttcgacaatcgaaacttcgcgccgaacaagccgttcagcttcgacacggcagcg
ctggccggtgcgagggctgcctccggaacaccggtcgaattgccgacagtcttgtcggcc
gagctacccgaggtgcatccgaaggaagtgaacctcgcagacttggtgaacttcctggta
catcccgcgcgtggttttctgcgccaacgcctcggcgtccgggtaccggaactcgacgac
gacatcgcggattcgctggcaaccgagctcgatccactgtccacctgggctctgggtgac
cgaatgcttctctcgcgcttggctggacgcagctcggcggatttccgtgcagccgagtgg
cgccgcggtactttgccgccctacaacctgggcgccacggttctgggcaacgtcgagtgg
gtggtagaccaacttgccggtcttgcattgccacacctcgagggcgactccgaggctgtc
gacgtcgacatcgacctcggtgacgggcgtcgtctcaccggaacggtaaccggtgtgcac
ggcgattcagtggtgcgagcgtcgtattcctcactggcgcctaaacatcggatgacggcc
tggataaacctgctcgccttgaaagcgcacggacgacccggtgcgctcgatgcagtctcg
atcggacggggtcggggaaagatcgcagcggcacggtcggtgctcgatgcgccgggcaat
gcggtcgagatcctgcagcaactggtggacctacgcgagcgggggctgcagcgtccgttg
ccgatgtgggccgctacttcagccgaatatgcgcgccgacgctttggtggcgagtcggtc
gacgatgcgacaaacggtgcggacacccagtggaccgggcagtacggcgagatgatcgat
ccaagcaacgcttacgttttcggagaagctcgaacactggcggagttggctgcggatccg
ccgtcggacgacgaattcgtctgggccgaggaaccgactcgattcggagttctcgcccga
cgactgtgggatccgttgctgaccaacgaaagagcggagtaa
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