Rhodococcus sp. NyZ502: ACBG85_11675
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Entry
ACBG85_11675 CDS
T11460
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhny Rhodococcus sp. NyZ502
Brite
KEGG Orthology (KO) [BR:
rhny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhny03032
]
ACBG85_11675
03036 Chromosome and associated proteins [BR:
rhny03036
]
ACBG85_11675
03400 DNA repair and recombination proteins [BR:
rhny03400
]
ACBG85_11675
DNA replication proteins [BR:
rhny03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACBG85_11675
Chromosome and associated proteins [BR:
rhny03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ACBG85_11675
DNA repair and recombination proteins [BR:
rhny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ACBG85_11675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
XEU11831
LinkDB
All DBs
Position
2495128..2495814
Genome browser
AA seq
228 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATDAVEHVVDTIVRAVHRGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGVAAPATKAAAKKAAA
KKTAAKKAPAKKAPAKTAAKKTVAAKAPAKKAPAKTAAKKTVAAKAPAKKAPAKTAAKKT
VATKAPAKKAPAKTAAKAPAKKAPAKKAPAKTAAKKAPAKKAPAKRAK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgttctgactgaaaagctgggttcggacaggcgcaca
gcgaccgacgcagtggagcacgtcgtggacaccatcgtccgcgccgtccaccgtggcgag
agcgtgaccatcaccggcttcggagtcttcgagcagcgtcgtcgtgcagcacgtgttgca
cgcaacccgcgtacgggcgagaccgtcaaggtcaagccgacgtcggttccggctttccgt
ccgggtgcgcagttcaaggctgttatcgctggtggacagaagcttccggccaccggcccg
gcagtcaagcgtggcgtagcagcaccggccaccaaggctgcagccaagaaggctgctgcc
aagaagaccgcagccaagaaggctccggccaagaaggctccggccaagaccgcagccaag
aagacggttgccgcgaaggctcccgccaagaaggctccggccaagaccgcagccaagaag
acggttgccgcgaaggctcccgccaagaaggctccggccaagaccgcagccaagaagacg
gttgccaccaaggctcccgccaagaaggctccggccaagaccgcagccaaggctccggcc
aagaaggctccggccaagaaggcccccgccaagaccgcagccaagaaggctccggccaag
aaggctccggccaagcgcgcaaagtag
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integrated database retrieval system
