Rhodococcus sp. NyZ502: ACBG85_11925
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Entry
ACBG85_11925 CDS
T11460
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
rhny Rhodococcus sp. NyZ502
Brite
KEGG Orthology (KO) [BR:
rhny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhny03016
]
ACBG85_11925
Enzymes [BR:
rhny01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACBG85_11925
Transfer RNA biogenesis [BR:
rhny03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACBG85_11925
Prokaryotic type
tRNA splicing ligases
ACBG85_11925
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NCBI-ProteinID:
XEU11877
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Position
complement(2549312..2550493)
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AA seq
393 aa
AA seq
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MEKITKRLWNWASILDENTREQALRTSQMPFVRPHLALMPDAHLGAGATVGSVIPTEGAI
MPAAVGVDIGCGMIAVKTQFNARDLQGRDLSVLRHSIERSVPLSAGVYNKTLSDTAKIRI
AELEAMAGDRLAFYDKFKNNWRFQLGTLGSGNHFIEVTLDESDGVWLFLHSGSRGIGNKL
AQHHIKIAKDLCERWYINLPDPDLAYLVEKTPEFDSYITDLNWAQHFALLNREEMMDRVV
KDFAHFMGDGKPAIIDEVERINCHHNFTQKEFHMGRGVWLSRKGAIKADEGTPGLIPGSM
GTASYVVVGKGNVPSFKSSPHGAGRVYGRNQARKTFTIEDLDKAMVGIEYKRSAAFLDEI
PGAYKDIDVVMDDAKDLVEIRHTLRQIVNVKCN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatcaccaagaggttgtggaactgggcatcgatactcgacgaaaacactcgg
gagcaagcgctgcgcacgtcccagatgccttttgtccgtccacatctggcattgatgccg
gatgcgcacctcggtgcgggagcgacggtgggttcggtcattccgacggaaggcgcaatc
atgcccgccgccgtcggagtcgatatcggctgcggaatgatcgcggtcaaaacccagttc
aacgcacgcgaccttcaaggccgcgacctgagcgtacttcgccacagcatcgaacgctcc
gttccgctctcggcaggtgtctacaacaagacgctgagcgacacggcgaaaatccgcatc
gcagaactcgaggcaatggcgggcgatcgcctggccttctacgacaagttcaagaacaac
tggaggtttcagctcggaacgctgggctctggtaaccacttcatcgaggtgacactcgat
gaaagcgacggcgtctggctgttcctgcactcgggaagccgcggtatcggaaacaagctc
gcgcagcatcacatcaagatcgccaaggacttgtgcgagcggtggtacatcaaccttccc
gatccggatcttgcctacctggtcgagaagacacccgaattcgactcgtacatcaccgat
ctcaactgggctcagcacttcgctctgctcaaccgcgaagagatgatggaccgcgtcgtg
aaggacttcgcgcacttcatgggagacggcaagcccgcgatcatcgacgaagtcgagcgg
atcaactgccaccacaacttcacccagaaggagttccacatgggcaggggtgtgtggctg
agccgtaagggtgcgatcaaggcagacgagggcacgcccgggctcatccccggttcgatg
gggacggcgagttacgtcgtcgtcgggaagggaaacgtaccgtcgttcaagtccagcccc
cacggcgcgggtcgggtgtacggacgtaaccaggcacgcaagaccttcaccatcgaagat
ctcgacaaggcaatggtcggcatcgaatacaagcgttccgcggcgttcctcgacgagatc
ccgggtgcgtacaaggacatcgacgtcgtgatggacgacgcgaaggacttggtcgagatt
cgacacacgctgcgtcagattgtgaacgtcaagtgcaactga
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