Rhodococcus sp. NyZ502: ACBG85_17770
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Entry
ACBG85_17770 CDS
T11460
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhny Rhodococcus sp. NyZ502
Pathway
rhny03030
DNA replication
rhny03430
Mismatch repair
rhny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACBG85_17770 (holA)
03430 Mismatch repair
ACBG85_17770 (holA)
03440 Homologous recombination
ACBG85_17770 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhny03032
]
ACBG85_17770 (holA)
03400 DNA repair and recombination proteins [BR:
rhny03400
]
ACBG85_17770 (holA)
Enzymes [BR:
rhny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACBG85_17770 (holA)
DNA replication proteins [BR:
rhny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACBG85_17770 (holA)
DNA repair and recombination proteins [BR:
rhny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACBG85_17770 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Peptidase_inhib_put
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
XEU07551
LinkDB
All DBs
Position
complement(3854304..3855281)
Genome browser
AA seq
325 aa
AA seq
DB search
MSNPSGVDPLHLVLGDDEFLIDRTVSQLIRAVRGDRGQGISDLPVTKMRAGDTNAPELAE
LLSPSLFAEDRVIVLESAAEAGKDAVALVLEAAREPAEGVVLIVVHSGGGRAKALAPALE
KLGATVHNCGKLNKSQLVDFVRGEFRTADVRVAPDAIAAMIESVGSNLRELASACSQLAA
DTGGKIDVDAVHKYYSGKAEVSGFDVADKVIVGDTRGALEALRWADQIGTAHVLLADALA
DAVHTIAKVGPFARGGDPFRLASDLGMPPWKVKKAIKEVGGWDPTSIGAAMQIVAALNAD
VKGAAVDSSFALEMAVRKVCALRKN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatccgtctggagtcgatccgctgcatcttgttctcggggacgacgagttcctg
atcgaccgcacggtatcgcagctcatcagagctgtccgcggtgaccgcggacagggtatt
tcggatctcccggtgaccaagatgcgcgcgggcgacaccaatgctcccgagttggccgag
ttgctcagcccttctctttttgccgaagaccgtgtgatcgtcttggaatcggctgcagaa
gcaggcaaagatgccgtagcgcttgtcctggaggctgcacgcgagccggcagaaggtgtg
gttctgatcgtcgtgcactcgggcggcggtcgcgcgaaagcgttggcaccggccctcgag
aagctcggggcgacggttcacaactgcggaaaactgaacaagagtcagcttgtcgacttc
gtccggggtgagtttcggaccgcagacgtcagggttgcgccagatgcgatcgccgcgatg
atcgaaagcgtcggctccaacctccgcgaactcgcgtcggcctgctcgcaattggcggca
gatacgggcggcaagatcgacgtggatgcagtccacaagtattactcgggcaaggccgag
gtttccggattcgacgtggccgacaaagtcatcgtcggcgatacccggggtgcgctcgag
gcgctccgatgggcagatcagatcggaacagcccatgttctgctcgcggatgccctcgcc
gacgcagtccacaccatcgcgaaggtcggcccgtttgcacggggcggtgacccgttccgg
ttggcgtcggatctcggaatgccgccgtggaaggtcaagaaggcgatcaaggaggtcggc
ggctgggatcccacgtcgatcggcgctgcgatgcagatcgtcgccgccctcaatgccgac
gtgaagggtgccgcagtcgactcgtccttcgccctggagatggcagtgcggaaagtgtgc
gcgttgcggaagaactga
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