Rhodococcus sp. NyZ502: ACBG85_19435
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Entry
ACBG85_19435 CDS
T11460
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhny Rhodococcus sp. NyZ502
Pathway
rhny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACBG85_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhny03019
]
ACBG85_19435
03009 Ribosome biogenesis [BR:
rhny03009
]
ACBG85_19435
Enzymes [BR:
rhny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACBG85_19435
Messenger RNA biogenesis [BR:
rhny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACBG85_19435
Ribosome biogenesis [BR:
rhny03009
]
Prokaryotic type
rRNA helicases
ACBG85_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XEU07850
LinkDB
All DBs
Position
complement(4261016..4262791)
Genome browser
AA seq
591 aa
AA seq
DB search
MSDIERDPEPPTFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLEGKDVVGLAQTGTG
KTAAFAVPVLSRIDTSIKQTQALVLAPTRELALQVAEAFGKYSAHIPGLNVLPIYGGQSY
GVQLSGLRRGAHVVVGTPGRVIDHLEKGTLDLTNLKYLVLDEADEMLKMGFQEDVERILR
DTPGDKQVALFSATMPGSIRRISKQYLNNPVEITVKSKTSTASNITQRYIQVAHQRKLDA
LTRVLEVEAFEAMIIFVRTKQATEDLAEKLRARGHSAAAINGDIVQAQRERTIGQLKNGA
LDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRQGDALLFVAPRERH
LLKSIEKATRQPLAEMQLPSVDDVNAQRVAKFGDSITESLASENLAMFRKMIEDYDQEHD
VPLIDIAAALALQSRDGEAFLLSPEPPAPPRREREPREPRPPRRFDDGPAPRSRGPEGQE
LAAYRIAVGKRHRVVPGAIVGAIANEGGLRRSDFGHISIRPDHSIVELPADLSNETLEAL
RRTRISGVLIQLQPDFGPPQGRPSGRGDRGGRDDRGGRDDRRGGGRDRYND
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgagcgtgaccccgaacccccaacatttgccgacctcgacatcgatgat
cgggtattgaaggcactgtcagacgtgggctacgagtcgccctcgcccattcaggctgcc
accattccgccactgctcgaaggcaaggacgtcgtcggcctcgcacagaccggtaccggc
aagaccgcagccttcgcagttcccgttctgtcgcggatcgacacgtcgatcaagcagacc
caggcgctggtgcttgctcccacgcgtgagctggcgcttcaggttgccgaggccttcggc
aagtactccgcgcacatccccggactcaacgtcctgccgatctacggtggccagagctac
ggcgtccagctgtcgggcctgcgccgcggcgcacacgtcgtcgtcggtaccccgggtcgt
gtcatcgaccatctcgaaaagggcaccctggatctgaccaatctcaagtacctcgttctc
gacgaggccgacgagatgctcaagatggggttccaggaggacgtcgagcgcatcctccgc
gacacccccggcgacaagcaggtcgccctgttctccgcaacgatgcccggctcgattcgc
cggatctcgaagcagtacctgaacaatccggtcgagatcaccgtcaagtccaagacgtcg
accgcctcgaacatcacgcagcgctacattcaggttgctcatcagcgcaagctcgatgca
ctgacccgagtcctcgaggtcgaggcattcgaggcgatgatcatcttcgtccgtaccaag
caggccaccgaagacctggcggagaagctgcgcgcccgcgggcactcggctgccgcgatc
aacggtgacatcgtccaggcccagcgtgagcggaccatcggtcagctcaagaacggcgcc
ctcgacatcctcgtcgcgaccgacgttgctgctcgaggcctcgacgtggatcgaatctcc
cacgtcgtcaactacgacatccctcatgacacggagtcgtacgtccaccgcatcggtcgt
accggccgcgccggtcgtcagggtgacgcgttgctgttcgtcgccccgcgtgagcgtcat
ctgctcaagtccatcgagaaggcgacccgtcagccgcttgcggagatgcagcttcccagt
gtcgacgacgtcaacgcccagcgcgtggccaagttcggtgactccatcaccgagagcctg
gcctcggagaatctcgcgatgttccgcaagatgatcgaggactacgaccaggaacacgac
gttccgctcatcgacatcgctgccgctctggcgttgcagtcgcgcgacggcgaagcattc
ttgctttctcccgagccgccggcaccgccgcgtcgtgagcgcgagcctcgtgaaccacgt
cctccccgtcgtttcgacgatggcccggccccgcgctcgcgtgggcccgagggccaggag
ctggccgcgtaccgcattgcagtcggcaagcgtcaccgcgtcgttccgggtgccatcgtc
ggtgccatcgccaacgagggtgggcttcgtcgaagcgacttcgggcacatcagcattcgc
ccggatcacagcatcgtcgagctgccggccgacctctccaacgagactctcgaagctttg
cgtcgcacacgcatctccggcgtcctgatccagctgcagcctgatttcgggccgccgcag
ggtcgtccgagtggccgtggcgaccgtggtggccgggacgatcgtggtggacgtgacgac
cgccgcggtggcggacgcgatcgctacaacgactga
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