Rhodococcus sp. NyZ502: ACBG85_23710
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Entry
ACBG85_23710 CDS
T11460
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhny Rhodococcus sp. NyZ502
Pathway
rhny03030
DNA replication
rhny03430
Mismatch repair
rhny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACBG85_23710
03430 Mismatch repair
ACBG85_23710
03440 Homologous recombination
ACBG85_23710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhny03032
]
ACBG85_23710
03400 DNA repair and recombination proteins [BR:
rhny03400
]
ACBG85_23710
Enzymes [BR:
rhny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACBG85_23710
DNA replication proteins [BR:
rhny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACBG85_23710
DNA repair and recombination proteins [BR:
rhny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACBG85_23710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
XEU08646
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All DBs
Position
5148980..5149660
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AA seq
226 aa
AA seq
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MSSWSDRPICAFDLETTGRDPSTARIVSACVAVIDGSSVETRTWLLDPGVDIPAGASAVH
GISTEFAAQHGQDYSEGYEEIREALHNSWARDHAVVAFNASYDLTVMHAEGLRIGKPAFV
PGLVIDPYVIDRAMDTFRKGKRTLAAVCEHYGISLESAHEAEADAKAAAALARELAVRFP
DILGLDLMVDQADWHAERQRDFAEYLLSQGRDVADVNGQWPIRIIA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctggtccgatcgcccgatctgcgcgttcgacctcgagaccacggggcgggat
ccgtcgaccgctcgtatcgtcagtgcctgcgtcgcggtgatcgacggttcgagtgtcgaa
acacgcacgtggctactcgatcccggcgtcgacatccccgccggcgcctcggctgttcac
ggcatcagcaccgagttcgcggcgcaacacggccaggattattccgagggctacgaagag
attcgcgaggctctgcacaattcctgggcgcgcgatcacgccgtcgtggcgttcaatgcc
tcctatgatctgacggtcatgcatgccgagggtctgcgcatcggcaagcctgcattcgtt
ccggggttggtgatcgatccgtacgtgatcgatcgggcgatggatacgttccgcaagggc
aagcgaacgcttgcggccgtgtgcgagcactacggaatttcattggagtcggcgcacgaa
gccgaggccgatgccaaagctgcggcagcgttggcccgcgagttggccgtgcggttcccc
gacatcctggggctcgatctcatggtcgatcaagccgattggcacgccgagcggcaacgc
gatttcgccgagtaccttctcagccaagggagggacgtggcagatgtgaacggccagtgg
ccgattcgcatcatcgcctga
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