Roseburia hominis: RHOM_00425
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Entry
RHOM_00425 CDS
T01621
Name
(GenBank) helicase SNF2 family protein
Organism
rho
Roseburia hominis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
AEN95212
UniProt:
G2SZ54
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Position
100261..103566
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AA seq
1101 aa
AA seq
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MFSVSDIKEDVYPAVYRRGKELYETGGVLDFAYDIYLEHDLPVAEVRAEVRGKEQSSYRV
TAVVDEEYGTVSSSNCTCEAFYNYEGMCKHCVAALLAYVNRRQAKDILAAKRTGHEAGEQ
GSAAEEKPVAPMQTAGAFKTLLNQYSLRAGVSYLIPESVYGKVELEPYFKLDYSYATVEF
KIGMEQKYVLKNISAFLHSIERNEKVHYGKKLDFYHNRQAFTEDAWRMVEFMRMQDDDKK
RQSRFHAYYAYTGGYERTMELDEVGIDRFFDAIGEMPLSAEIGYLPEEEYHVQEGERKPK
LEIRAGASGVFVLLEDLQVIRGSRFYYFYEDGMIYRSSEALKAKTGDFFDYMERQAGGEC
YIAADELPSFCRDLLPLLRETFRVTAEGFDETLYVPKKPEFELYLDKQDNQTVGAKLVAA
YGDDKYNVLQKIEPGEVRDLGEEMRVRTLVEPYFNEYGLGQTIFILSHNEDMLYQLISSG
LQRLSEYMSIYTTEDFRGMKVVSSPSVSVGVALKSDLLELQIHSDEMSREELAYLLTRYD
RKKKYVRLKNGDFLDVREDGLGLLAEISEDLRLTESGLKKGHVNVPKYRAMYLDAALKSN
QELSVEKNREFKGMVRNMKTIEDSDYEVPDSLRSIMRGYQKSGFLWLKTLRENGFGGILA
DDMGLGKTLQVISLLLSEQESAKAGEREWHRSLIVCPASLVYNWQKEISRFAPQIKTTLV
TGLATERQRIVRHTKEGEVLITSYDLLKRDVELYRDMVFAIQVIDEAQYIKNPGTQAAKG
VKQITAGFKLALTGTPIENRLSELWSIFDYLMPGFLYTYQRFREEIEIPIVVNGDENRMQ
RLQRMIRPFILRRLKGEVLRDLPAKLEENVFAKLEGEQLALYDAHVQRMKESLEGKSEKE
FRSEKIQILAELTRLRQICCDPGLLFEGYKGESAKAQMCMELIENAVGAGHKVLLFSQFT
SMLDRLAAGLKKAGIDYYMLTGSVGKEKRMQMVESFNEDDVPVFCISLKAGGTGLNLTAA
DIVIHYDPWWNVAVQNQATDRAHRIGQKHVVTVYKLVSEGTIEEKIIAIQERKKELAKQV
LEGEGMDSVSFTKEEILELLG
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgtatcggatatcaaagaggatgtgtatccggcagtctaccggagaggaaag
gaattatatgagacagggggcgtgctggatttcgcgtatgatatttatctggagcatgat
ctgcccgttgccgaggtgcgagcggaggtacgtgggaaggaacagagcagctaccgggtg
acggcggttgtcgatgaggagtacggcacggtgtcaagcagcaactgtacctgcgaagcg
ttttataattatgagggaatgtgcaaacactgtgtcgcagcgcttcttgcttatgttaac
cgaaggcaggcgaaggacattctggctgcgaagcgcaccggacatgaggcgggagagcag
ggaagcgccgcggaggagaagcctgtcgccccgatgcagacggcaggagcgttcaagacg
cttttgaaccagtattcactgcgtgccggtgtgagctatctgattccagagagcgtctat
ggaaaggtggaactggagccttattttaagctggattacagttatgcgacggtggaattt
aagatcggaatggagcagaagtatgtattaaagaatatttctgcctttttacattccatc
gagcggaatgaaaaggtgcattacggtaaaaagctggacttttatcacaacagacaggca
tttacagaagatgcatggcggatggtagagttcatgcggatgcaggatgacgacaagaaa
cgccagagcagatttcatgcctattatgcttacactgggggatatgagcgcacgatggag
ctcgatgaggtcggcatcgaccgtttttttgacgccatcggggaaatgcctttatctgcc
gaaatcgggtatctgccggaggaggagtatcatgtgcaggagggagagcgcaagccgaag
cttgagatccgcgcaggggcgtctggtgttttcgttctgctggaggatctgcaggtcata
aggggaagcagattttactatttttatgaagatggcatgatctatcgcagcagtgaggcg
ttaaaggcgaagacgggagactttttcgactatatggagcgtcaggccggcggggaatgt
tacattgcggcggatgaactgccgtcgttctgccgggatctgctgccgcttttaagagag
acgttccgggtgacggcggagggcttcgatgagacgctctacgtcccgaaaaagccggag
tttgaactgtatctggacaagcaggacaaccagacggtcggtgcgaagctggtcgctgcc
tacggggacgacaaatataacgtattgcagaagattgagccgggcgaggtgcgggatctt
ggggaggagatgcgcgtgcgcacgctggtcgagccgtacttcaacgaatacggactcggg
cagacgatcttcattctctcgcacaacgaggacatgctctatcagctcataagcagcggt
ctgcagcgcctcagcgagtatatgtcgatctacacgacggaggatttccggggaatgaag
gtcgtctcatcgccgtcggtttcggtgggcgttgcgctaaagagcgatcttctggaattg
cagatccactcggatgagatgtcgcgcgaggagctggcatatcttctgacccggtacgac
cggaaaaagaaatacgtccgtctgaaaaacggagattttcttgatgtgcgcgaggatggt
ctgggactgcttgcggagatcagcgaggatctccgcctgacagaatccggactgaaaaaa
ggtcatgtgaacgtaccaaaataccgcgcgatgtatctggacgcggcgttaaagagcaat
caggagctttccgtggagaaaaaccgcgagttcaagggcatggtccgcaatatgaagacg
atcgaggacagcgattatgaggtgccggattcgctccgcagtatcatgcgcggctaccag
aagagcggttttctgtggttaaagacactgcgcgagaacggattcggcggaatccttgcg
gacgatatgggactgggcaagaccctgcaggtcatcagtctgctcttgtcggaacaggag
agtgccaaggcaggagagcgggagtggcaccgttccctcatcgtatgtccggcgtcgctc
gtctacaactggcagaaagagatcagccgttttgcaccgcagatcaagacgacgctcgtg
accggactcgccacagagcgccagaggattgtcagacacacgaaggaaggggaagtgctg
attacgtcctacgacctgttaaaacgcgacgtggagctgtaccgcgatatggtgtttgcg
attcaggtgatcgacgaggcgcagtatatcaagaaccctggaacccaggcggcaaaaggc
gtcaagcagattactgcgggtttcaagctggcgctgaccggaacgccgatcgagaaccgg
ctgagcgaactgtggagcatttttgattatctgatgccgggatttttatatacttatcag
cggttccgagaggagatcgagatcccgatcgtggtaaacggggatgaaaaccgtatgcag
cgcttacagcgcatgatccggccgtttattctgcgccgtctgaagggggaagtgctgcgg
gatcttccggcgaagctggaggagaatgtcttcgcgaagctcgaaggagagcagcttgcg
ctctatgacgcccatgtgcagcgcatgaaggagagcctggagggcaaatccgagaaggaa
ttccgctccgagaagatccagattcttgcggagctgacgagactgcgccagatctgctgt
gacccggggcttctgtttgagggctataagggggagtccgcaaaggcgcagatgtgcatg
gaactgatcgagaacgcggttggtgccgggcacaaggtgttattgttctcgcagtttacg
tccatgctggatcgtctggcggcagggcttaagaaggccgggattgactactatatgctg
accggttctgtcggcaaggaaaagcgcatgcagatggtggagagctttaacgaggacgac
gtgccggtattctgtatttccttaaaggcaggaggaaccgggctgaacctgacggccgcg
gatattgtgatccactatgatccgtggtggaacgtggcggtgcagaaccaggcaacggac
cgcgcccaccgcatcgggcagaagcatgtcgtgacggtctacaagctggtatccgaggga
acgatcgaggagaagatcattgcgatccaggagcgcaaaaaagaactggcaaaacaggtg
ctcgagggggagggaatggattccgtttcctttaccaaggaggaaattctcgaacttctg
ggataa
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