Roseburia hominis: RHOM_00985
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Entry
RHOM_00985 CDS
T01621
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rho
Roseburia hominis
Pathway
rho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHOM_00985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rho03021
]
RHOM_00985
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_00985
Enzymes [BR:
rho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHOM_00985
Transcription machinery [BR:
rho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHOM_00985
DNA repair and recombination proteins [BR:
rho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHOM_00985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
ApbA_C
DUF1659
Motif
Other DBs
NCBI-ProteinID:
AEN95324
UniProt:
G2SZ85
LinkDB
All DBs
Position
225693..229370
Genome browser
AA seq
1225 aa
AA seq
DB search
MPETMNKEATGQSISFDAIKIGLASPEKIHEWSRGEVKKPETINYRTLKPEKDGLFCEKI
FGPSKDWECHCGKYKKIRYKGVVCDRCGVEITKASVRRERMGHIELAAPVSHIWYFKGIP
SRMGLILDLSPRTLEKVLYFASYIVLDAGNTALQYKQVLSESEYQEAREQYGNAFRVGMG
AEAIQELLHAIDLEKDSAELQAELADATGQKRARIIKRLEVVEAFRESGNKPEWMILTVI
PVIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLRRLLELGAPDIIVRNEKRMLQEA
VDALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQNLLGKRVDYSGRSVICVEPKLK
IYQCGLPKEMAIELFKPFVMKELVANGTAHNIKSAKKMVERLQTEVWDVLEDVIKEHPVM
LNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRF
MLLSPNNLLKPSDGGLVAVPSQDMVLGIYYLTQERPGAKGEGKFFKSVNEAILAYENGAV
TLHSRIKVRMSKTMPDGKKITGIVESTLGRFIFNEIIPQDLGFVDRSIPGNELKLEVDFL
VAKKQNKQILEKVINIHGATRTAEVLDAVKAMGYKYSTRAAMTVSISDMTEPPEKPQMIK
DAQDTVDRITKQYKRGLITEEERYKEVVETWKETDEQLTHALLSGLDKYNNIFMMADSGA
RGSDKQIKQLAGMRGLMADTTGRTIELPIKSNFREGLDVLEYFMSAHGARKGMSDTALRT
ADSGYLTRRLVDVSQHMIVRESDCCEGTGREIPGMWVTAFMDGKEEIESLQERITGRFSC
NTICDAEGNVLVKANHMITPKRAALVMSKGVDENGEPLTKVKIRTVLSCRSHMGVCAKCY
GANMATGQAVQVGEAIGIIAAQSIGEPGTQLTMRTFHTGGVAGTDITQGLPRVEEIFEAR
KPKGLAIITEFSGVANIKDTKKKREIVVTNNETGESKAYLIPYGSRIKVMDGAVLEAGDE
LTEGSVNPHDILKIKGVRAVQDYMLREVQRVYRLQGVEINDKHIEVIVRQMLQKVRVETN
GDSDMLPGTLVDTLDFEDTNELLEKEGKELAEGKQVLLGITKASLATNSFLSAASFQETT
KVLTEAAIKGKVDPLIGMKENVIIGKLIPAGTGMKRYRNIKLSSDIDENEEIAFDDFDDF
DDTDVADENYTLEENAPEESEDTEE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgccagagacaatgaataaagaggcaacaggccagtctatctctttcgatgccattaag
atcggtttggcatcaccggagaagattcatgagtggtccagaggcgaggttaagaagcct
gagacgatcaactacagaacattaaagcctgagaaggatggtctgttctgtgaaaagatt
ttcggaccgagcaaggactgggaatgccactgtggtaaatacaagaagatccgctacaaa
ggtgtggtatgtgaccgatgcggcgttgagattacaaaagcaagcgttcgtagagagcgt
atgggacatatcgagcttgcagctccggtttcccatatctggtactttaagggaattccg
tcccgcatgggactgattcttgacctctcaccgagaactcttgagaaggtattatatttt
gcatcatacattgtactggatgccggtaacacggcattacagtataagcaggtgctttcc
gagagcgaatatcaggaagccagagagcagtacggcaatgcgttccgtgtcggaatgggt
gccgaggcaatccaggaactgttacacgcgatcgatcttgagaaggattccgcagagctt
caggcagagcttgcagacgcaaccggtcagaagcgcgcgcgcatcatcaagagactggaa
gttgtagaagcattccgcgagtccggcaacaagccggagtggatgatcctcacggtcatc
ccggtcattccgccagatctgcgcccgatggtacagctggatggcggacgttttgcaaca
tccgacttaaatgatctgtacagaagaatcatcaaccgtaacaaccgtctgagaagactc
ttagagcttggcgcaccggatatcatcgtccgcaacgagaagcgtatgcttcaggaggct
gtagatgccctgatcgataacggccgccgcggacgtcctgttacaggaccgggtaacaga
gcactcaagtctctgtctgacatgttaaaaggtaagtccggacgtttccgtcagaacctg
cttggtaagcgtgttgactattccggacgttccgttatctgcgtagagccgaagttaaag
atttaccagtgcggtcttccgaaggaaatggcaatcgagctgttcaagccgttcgttatg
aaggagctcgttgcaaacggaaccgctcataatatcaagagtgcgaagaagatggtcgag
agacttcagactgaggtctgggatgtgctcgaggacgtcatcaaagagcatccggttatg
ctgaaccgtgctcctacactgcaccgtctcggtattcaggcattcgagccgatcctcgta
gagggtaaggcaatcaagcttcatccgcttgtgtgtaccgcgttcaacgccgatttcgat
ggtgaccagatggctgttcatcttccgctttctgtggaagcgcaggcagagtgccgtttc
atgctgctctctccgaacaacctgttaaagccgtctgacggtggactggtagccgttcct
tcacaggatatggtgcttggtatttactacctgacacaggagagaccaggcgcaaaggga
gaaggcaaattcttcaagagtgtcaacgaagcaatcctcgcctatgagaatggcgcggta
acacttcactccagaatcaaagtccgcatgagcaagaccatgccggatggaaaaaagatt
accggaatcgtagagtccacgctgggacgtttcatcttcaacgagattatcccgcaggat
ctgggctttgtagacagaagcattccgggcaatgaattaaagctcgaggtcgatttcctc
gtagcaaagaagcagaataagcagatccttgagaaagtcatcaatattcacggcgcaacc
agaactgccgaggtgctggatgctgttaaggcgatgggttacaaatactccaccagggcg
gcaatgaccgtatccatttccgatatgaccgagccgccggaaaagccacagatgatcaag
gacgcccaggataccgtagaccgcattacaaagcagtataagcgtggtcttatcacagag
gaagagcgttacaaggaagtcgtagagacatggaaagagacggatgagcagctgacacat
gcacttctctccggactggataagtacaacaacatcttcatgatggcggattccggagcc
cgtggttccgataagcagatcaaacagcttgctggtatgcgaggacttatggcagataca
accggtagaacaatcgagctgccaatcaagtccaacttccgtgaaggtcttgacgtactg
gaatacttcatgtctgcgcatggagcgcgaaaaggtatgtccgataccgcccttcgtacc
gccgattccggatacctgaccagacgtctggtagatgtatcacagcatatgatcgttcgt
gagtctgactgctgtgagggaacaggcagagagatccctggtatgtgggtaactgcattc
atggatggcaaggaagagatcgagagccttcaggagcgtattacaggacgtttctcctgc
aataccatctgcgatgccgagggcaatgtcctcgtgaaggcaaatcatatgattacaccg
aagcgcgcagcgcttgttatgagcaagggtgtggatgagaacggagaaccgcttacaaag
gtgaagatccgtactgtattatcctgccgttcccacatgggtgtgtgtgcgaagtgctac
ggtgccaacatggcaaccggccaggcagtacaggttggtgaggcaatcggtatcatcgcg
gcacagtccatcggtgagcctggtacacagcttaccatgcgtacgttccatacgggtggt
gttgccggtaccgatattacacagggtcttccgcgtgtcgaggaaatttttgaggcaaga
aagccgaagggacttgcgatcattaccgagttcagcggtgttgccaatatcaaagatacc
aagaagaagcgtgagatcgttgtgacgaacaatgagactggagagagcaaggcatatctg
attccttacggttccagaatcaaggttatggacggtgcagtcttagaggccggcgacgag
ctgacagaaggttctgtcaacccgcatgatatcttaaagatcaagggtgtgcgtgccgtt
caggattacatgcttcgcgaagtacagcgtgtataccgtctgcagggtgttgagatcaac
gataagcatatcgaggtgatcgtgcgccagatgctgcagaaagtccgtgtggagacaaac
ggagattccgatatgctcccgggaacattagtagatacgcttgacttcgaggatacaaat
gagcttctggagaaagagggcaaggagcttgcagaaggcaagcaggtactgcttggtatc
acaaaggcttctcttgcaaccaactccttcctgtcagcagcatccttccaggagaccaca
aaggttctgacggaagctgccatcaagggtaaggttgatccgctcattggtatgaaggag
aacgttatcattggtaagctgatcccggctggtaccggtatgaagagataccgcaatatc
aagctgagctcggatattgatgagaacgaggagattgcattcgatgatttcgacgatttt
gatgacactgatgtggcagatgagaattacacattagaggagaatgcgccggaagagtcc
gaggatacagaagaataa
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integrated database retrieval system
