Roseburia hominis: RHOM_01085
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Entry
RHOM_01085 CDS
T01621
Name
(GenBank) HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rho
Roseburia hominis
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rho03019
]
RHOM_01085
Messenger RNA biogenesis [BR:
rho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RHOM_01085
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Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
oligo_HPY
Motif
Other DBs
NCBI-ProteinID:
AEN95344
UniProt:
G2SZA5
LinkDB
All DBs
Position
258977..259930
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AA seq
317 aa
AA seq
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MKYIESLREGERINEIYLCKVKQSALTKAGKPYDNLILQDKTGTLDAKIWEPGSVGIDEF
DSLDYIAVMGDITSFQGNLQLNVKRVRKVQEGEYDPKDYLPVSKKDIDGMYTELLGLIAS
VKHPYLRKLLESFFVEDKDFEKRFKFHSAAKSVHHGFVGGLLEHTLSVTKNCDYFAATYP
ILNRDLIVSAAIFHDIGKLEELSTFPENDYTDEGQLLGHIMIGAEMVGERIRTIPGFPKG
TANELKHCILAHHGELEYGSPKKPALAEALALSFADNIDAKMETIREIFASVPENNLEWQ
GYNRLLESNIRRSGRES
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatattgagagcctgcgtgagggcgagagaatcaacgaaatctatttgtgcaag
gtaaagcagtcagcgctgacaaaggcgggaaagccttatgataatctgatcctgcaggat
aagaccggtacactggacgccaagatctgggagccgggctcggttggaatcgatgagttt
gattcgttagactacatcgcagtcatgggagacatcacaagttttcagggaaatctccag
ctcaacgtaaagcgtgtgcgcaaggtgcaggaaggggaatacgatccgaaagattatctg
ccggtatccaaaaaggacatcgacgggatgtatacagagcttctcggactgattgcttcc
gtgaagcacccgtatttaagaaagcttctggagagcttttttgtcgaggataaggatttt
gaaaaacggttcaagtttcattccgcagcgaagagcgtgcatcacggatttgtgggcgga
ctgctggagcatacgctctctgtgacgaagaactgtgattattttgcggcaacctatccg
atattaaaccgcgatctgatcgtgtctgcggcaatttttcatgatatcggaaagctggag
gaactctcgacgttcccggagaacgattacacggatgagggacagcttttaggacacatc
atgatcggcgccgagatggtcggagagcggatccgcacgattccgggattcccgaaggga
accgccaatgagttgaagcactgcattttagctcaccacggagaactggaatacggttcg
ccgaagaaaccggcacttgcggaggcactggcactcagttttgcggacaatattgacgcc
aagatggagacaatacgggagatttttgcaagtgttccggagaacaatctggagtggcag
ggatataaccgcctgctggagagcaatatccgcagatcaggaagagagtcatag
DBGET
integrated database retrieval system
