Roseburia hominis: RHOM_04545
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Entry
RHOM_04545 CDS
T01621
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rho
Roseburia hominis
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rho03000
]
RHOM_04545
Transcription factors [BR:
rho03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RHOM_04545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
MarR
HTH_38
HTH_3
TrmB
HTH_31
HTH_Crp_2
HTH_24
HTH_Tnp_ISL3
HTH_7
HTH_26
HTH_IclR
TetR_N
HTH_23
MarR_2
HTH_10
HTH_AraC
HTH_AsnC-type
HTH_28
HTH_11
Mgm101p
DUF2982
Fe_dep_repress
TnsD
HTH_5
OB_RRP5
HTH_6
IF2_N
Trp_repressor
HTH_35
Motif
Other DBs
NCBI-ProteinID:
AEN96031
UniProt:
G2T286
LinkDB
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Position
complement(980163..981167)
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AA seq
334 aa
AA seq
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MKKDKITVADIAKKAGVSPATVSRVLRHRELVKSETIQQVENAMSALGCLLEKGTIAAAT
EQPLIILNVPELDNVFYLKVIDGALVSAKAHGYRLLINDSPLDRSSIYSFINLLKQVHAA
GVILLNHVSKEQLDMIHSVVPLVQCSEYNEHADYPYVSIDDYSAATSAAEYIVSCNCNKI
AMINGPMSFKYAVKRQEGFLDTLRKKDISVRPDWIVSLPEVNYQMAYSAVCRLLNNEIRP
NAFFVISDVFAAAVIRAAKRFDLRIPEDIIVVGFDNLDISIMTCPTITTVNQPSFQLGYS
ACELLLDSINHPDMFPKSLILDTELIIRESSAKI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagataaaattacggtcgcagacatcgcaaaaaaagcaggggtctcccctgcc
actgtttcccgagtgttgcgtcatagagaacttgtaaaatccgaaaccatccagcaagtc
gaaaatgccatgtccgcactgggatgtcttctcgaaaagggtactatagctgcggctacc
gaacagcctcttattattttgaatgttccggaactcgataacgttttctacctgaaagtc
atcgacggcgcccttgtatccgccaaggcacacggttatcgtctgctgatcaacgactcc
ccgcttgaccggagttctatttactcttttatcaatctgttaaaacaggtacatgccgcc
ggagtcattttattgaatcatgtctccaaggaacagctggatatgatccactctgtcgta
ccgttagttcaatgcagcgaatataacgagcacgcggattacccttatgtcagcatagac
gactatagtgccgcaacaagcgctgcagaatatattgtttcctgtaattgtaataaaatc
gcaatgataaacggtcccatgtcctttaaatatgctgtgaagcgtcaggaaggttttctt
gatacgctccgcaaaaaagatatttccgttcgtccggactggattgtcagcctgcctgaa
gtaaattaccagatggcatactccgcagtctgccgtctgttgaataatgaaattcgtcca
aatgcttttttcgttatctcagacgtttttgccgccgctgtcattcgtgccgctaaacgc
tttgatcttcgtattccggaggatattattgtcgtcggatttgataacctggacatctcc
atcatgacctgtccgacgattaccactgtaaaccagccgagttttcagctgggctattcg
gcatgcgaacttcttcttgattccatcaaccatcctgatatgtttcccaaatctctgatt
ctggatacagaacttatcatccgggaatccagcgcaaaaatttaa
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