Roseburia hominis: RHOM_06080
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Entry
RHOM_06080 CDS
T01621
Name
(GenBank) AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rho
Roseburia hominis
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_06080
Enzymes [BR:
rho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHOM_06080
DNA repair and recombination proteins [BR:
rho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RHOM_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEN96335
UniProt:
G2T1A5
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All DBs
Position
1332530..1336096
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AA seq
1188 aa
AA seq
DB search
MSLQFVFGNSGSGKSDYLYQSILEEAEREPEKNFLLLVPEQFTMQTQRELVWRQPNHAIM
NVDVLSFVRLAYRVFDDLGMQDLVILEETGKNLVLRKVAELKKKELSVLGGNLNKMGYIG
EIKSLISEMAQYNITPEDLGAFLGAQDVGDTLRCKMQDILTMYEGFREYIDGKYITAEEI
LTLLCEVAEESELIRDSVIVFDEFTGFTPIQNRLLRVMLPLADRVIVSLSMDIREDFYHS
RGVHELFSMSKETVQTLLKIAADAGCEVLSPVIMEPGEHRRYENAPELFFMEQNLFRPMY
RKWRKPVNDISITSLKDPRQELSFVAREIVRLVRTKGYRYRDFAVVTGDVPQYANYVPET
FAQYGIPFFIDQTRNILFHPFIEFIRAALEVVEFDFSYQSVFRFLRSGLAGRLLTENKTE
QTADEDGAGAGAGVNDEDGAGAGAGADAEDVIDRLENYVLAKGIRGRKRWSEKWTSVTKR
DACHPEAAQEEMALLNRVRERIVLAFEPLCGLFSGKKHTVAEQTYGLYEFISALDIEAQL
KEKQFLLEQAEETEYNGVRRNQTRAQEYGQIYKIVMDLFDKVTSLLGEEQMSIREYGDIL
DAGFSAAKVGMIPPGNDRVTVGDIERTRLNHIRILFFVGVNDGIVPKAGSTGSIISQFER
EKMAEHHLMLAPGAREKVFIQKFYLYLNLTKPSDGLYVTYSRVSPEGKALRRSYLIGTLC
NMFPELKIREPEEETEASAILTPESGIDYLLEGLWTEQKSHTWKALAKWYLSDETYHAKA
LRLLAASFYRYSGEPIGKEVARALYGTELENSVTRLEQFAECAFAHYMTYGLGLSQRELQ
EFAGVDMGNIYHDALWHFAERIRRSSYTWYDLPEQTREAWIEESMNDAIAGCANVGAFDE
AKNRYLLSCMKDTIRRTVWALTIQVQKGRFTPSDFEVSFSQADHLEAIRFQLTEEEKMRL
RGRIDRVDTCETDDKVYVKIIDYKSGNTTFSLLNLYHGLQLQLVVYMNAALELEAKKHPG
KQAVPAGMFYYHIEDPMVDGSGTESEEEIRQAVLEELKPNGLVNDDPEIYGAMDTELSGS
SAVIPVALKADGSLKATSKTASTEEFETMSDYVKETVTKAGRRILGGDVAAAPYELDGRS
GCDYCPYHMVCGFDARIPGFSYRKLEKPDGAEAILAKMRETRSEEKRQ
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacagtttgtgttcggcaattccggaagcggaaagtccgattatttatatcag
tcgatattggaggaagcggaaagggaaccggagaagaatttccttttgcttgttccggaa
caatttacgatgcagacgcagcgcgaacttgtgtggcggcagcccaatcatgccatcatg
aacgtggatgtgctcagttttgtgcgtctggcgtaccgtgtgtttgacgatctcggaatg
caggatctggtcattttagaggagacgggcaagaatctggtgctgcgcaaggtggcggag
cttaagaaaaaggaactctcggtgctcggtggcaatctcaacaaaatgggatacatcggc
gagatcaagtccctgatctcggagatggcgcagtacaatatcacgccggaggatcttggc
gcttttctaggcgcgcaggatgtcggggataccctgcgctgtaagatgcaggatattctt
acgatgtatgagggattccgggagtatattgacgggaaatacatcacggcggaggagatt
ctgacgctcttgtgtgaggtggcggaggaatccgagctcatcagggacagtgtgattgtc
tttgacgaatttacgggattcaccccgatccagaaccggctgcttagggtgatgctgccg
cttgccgaccgcgtcatcgtgtcgctctccatggatatccgggaggatttttaccacagc
agaggcgtgcacgagcttttttccatgagcaaggagaccgtacagacactgcttaagatt
gcggcggatgcgggatgcgaggtactctctccggtgattatggagccgggagagcacagg
cgctatgaaaatgcaccggagctgtttttcatggaacagaatctgttccgtccgatgtac
cggaagtggcggaagccggttaatgacatcagcatcaccagcttaaaggatccgcgccag
gagctttcttttgtcgcaagggagattgtgcgtctggtacggacaaagggctaccgttac
cgggattttgcggtggtgaccggagacgtgccacagtatgccaactacgttccggagacg
tttgcacagtacgggatcccgttttttatcgaccagacgagaaacattctgtttcacccg
ttcatcgagtttatccgcgcggcgcttgaggtcgtggagtttgatttctcctatcagagt
gtgttccgcttccttcggagcggactggcgggacggcttctgacggagaataagacggag
cagacggcagacgaggacggcgctggagccggagccggagtgaatgatgaggacggcgct
ggagccggagccggtgcggatgcagaggatgtgattgaccgcctggagaattatgtgctt
gcaaagggaatccgcggcagaaagcgctggagcgagaaatggacgtctgtgacgaagcgg
gatgcctgccatccggaggcggcgcaggaggagatggctcttttgaaccgggtgcgggag
cggatcgttctggcatttgagccgctgtgtggacttttttccgggaaaaaacacacggtt
gcggagcagacctacggactgtatgagtttatctcggcgctggatattgaagcgcagctt
aaggagaagcagttcctcttagaacaggcggaggagacggagtacaacggcgtgcgcagg
aaccagaccagagcgcaggagtatggtcagatttataagatcgtgatggatctttttgac
aaggttacatcgttgctcggggaggagcagatgtcgatccgggagtacggagatattctg
gacgcaggattttctgcggcaaaggtcggtatgattccgccgggaaatgaccgcgtgacg
gtcggagacattgaacgcaccagattaaatcatatccggattctgttctttgtgggggtc
aatgacggtatcgtgccgaaagccggcagcaccggaagcatcatctcacagttcgagcgc
gagaagatggcggagcatcatctgatgttagcgccgggggcgcgggaaaaagtttttatc
cagaagttttacctgtatctgaacttaaccaagccgtcggacggattgtatgtcacctac
tcgagggtcagtccggagggaaaggcgctgcgccggtcttatctgatcggaacgctctgc
aatatgttcccggaactaaagatccgtgagccggaggaggagacggaggcgtccgcgatt
ttaacgccggagagcgggatcgattatctgttggagggactctggacagaacaaaagtca
catacctggaaggcgcttgcaaagtggtatctctcggatgagacttatcatgcgaaggcg
ctgcgcctgcttgcggcatctttttaccgttacagcggagagccgatcggaaaagaggtt
gcgcgcgccttatacggcacggaactggagaacagtgtcacaaggctggagcagtttgcg
gagtgtgcgtttgcgcattacatgacctacggactgggactgtcgcagcgggaactgcag
gagtttgccggcgtggatatgggaaatatctatcatgacgcgctgtggcattttgcggag
cgcatccgcaggtcttcgtatacctggtacgatctgcccgaacagacgcgtgaggcgtgg
attgaggagagcatgaatgacgcgattgcgggctgtgcgaatgtgggcgcattcgacgag
gcgaagaaccgctatctgctgtcgtgcatgaaagacacgatccggcgcacggtgtgggcg
ctcacgatccaggtgcagaaggggcgttttacgccgagtgattttgaggtgtcgttttcg
caggccgatcatctggaggcaatccgctttcagctgacagaggaggaaaaaatgcgtctg
cggggcaggattgaccgtgtggatacctgtgagacggacgataaggtgtatgtaaagatc
attgattacaaatcgggcaacaccacattttccctgctgaatctgtatcacgggctgcag
ctgcagctggtggtttatatgaatgcggcgctcgaactggaggcaaaaaagcatccggga
aaacaggcggtgcctgcgggaatgttttactatcacattgaggatcccatggttgacggc
agcggcacagagtcggaggaggagatccggcaggccgtgctggaggaattaaagccgaac
gggttagtcaacgacgatcccgagatatacggggcgatggatacggaactttccggaagc
tccgcagtcattcctgtggcgcttaaagcggacggttccttaaaagcgacgtccaagacg
gcgagtacggaagaatttgagacaatgtcggactacgtgaaggagaccgtgacgaaggcg
ggcagaagaatcctaggcggagatgtggcggcggcaccgtatgaactcgacgggagaagc
ggctgcgattattgtccgtatcacatggtgtgcggatttgacgcgcggataccgggcttt
tcttaccggaagttagaaaagccggacggtgccgaggcgattcttgcgaaaatgagagag
acgcgaagcgaggagaagagacagtag
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