Roseburia hominis: RHOM_07200
Help
Entry
RHOM_07200 CDS
T01621
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
rho
Roseburia hominis
Pathway
rho03030
DNA replication
rho03430
Mismatch repair
rho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHOM_07200
03430 Mismatch repair
RHOM_07200
03440 Homologous recombination
RHOM_07200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rho03032
]
RHOM_07200
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_07200
Enzymes [BR:
rho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHOM_07200
DNA replication proteins [BR:
rho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHOM_07200
DNA repair and recombination proteins [BR:
rho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHOM_07200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
HHH_6
Rv2179c-like
RNase_H_2
DNA_pol3_a_NII
DEDDh_C
tRNA_anti-codon
Cript
DUF3682
Motif
Other DBs
NCBI-ProteinID:
AEN96555
UniProt:
G2T3I4
LinkDB
All DBs
Position
1576610..1581133
Genome browser
AA seq
1507 aa
AA seq
DB search
MAKRFFDVFPSLQVEGDMKNLLTETEVTKVGMNHERDHLRVYLSSTRLIHKKDIRQLESA
IAQQIFKGRMMQVKVIEKYHLSEQYTPEKLLDLYRDSILEELKDYSLMEYNLLRTAKMEF
TSESHMLLTLENTIIAQTRSHEIVEFLEKVICERCGLDLAVELAYEEPKESKYKKNSDLQ
IQFEIKNIMKKVHIRNGDGESVPAVAEGGAEAVSDGTTTSGGTGGNATTNTVSSAKNAAK
PAEHAGKTAGNGEKGKKEFKRRFEGGGLKKSDNPDVIYGRDFEDEPIAIEKIVGEMGEVT
IRCQVMTLETREIRNEKTIVIMSVTDFTDSIVLKIFTRNDQLQELLDGGLAKGAFLKIKG
VTTIDKFDSELTIGSVVGIKKIADFTSTRADTSPEKRVELHCHTKMSDMDGVSDVKDIVK
RAMKWGHKAIAITDHGDVQAFPDANHAVPPDSDFKIIYGVEAYLVDDLKDIIVDSKGQSL
NDSYVVFDLETTGLSPDKNKIIEIGAVKVVDGAITERFSTFVNPEVPIPYNIEQLTSIKD
DMVLDAPRIEEILPEFMKFCEGTVMVAHNAEFDTGFIRKNCERMGLPFDFTIADTVALAR
ILLPQLNRFKLDTVAKAVGVSLDHHHRAVDDAACTAEIFVKFIEMLHERGMETLDDVNQM
GATSPELVKKLKSHHAIILATNDIGRINLYRLVSMSHLTYFHKTPRVPKSEFVKYREGLL
LGSACEAGELYRAILDGRPEEEIIRLVKFYDYLEIQPIGNNSFMLRDEKSAINSVEELQD
INRRIVKLGETFNKLVVATCDVHFLDPEDEVYRRIIMAGKGFKDADDQAPLFLRTTEEML
KEFEYLGSTKAEEVVITNPGKIADMCEKIAPVRPDKCPPVIENSDQMLRDICYTKAHSMY
GEELPSIVKERLDRELNSIISNGYAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFAATMS
GITEVNPLQAHYRCAYCKYSDFDSPEVKAFSGRSGCDMPDKICPVCGKKLVKDGFDIPFE
TFLGFKGNKEPDIDLNFSGEYQSKAHAYCEVIFGYGQTFRAGTIGTLADKTAFGYIKNYY
EERGVHKRNCEIDRIVQGCVGVRRTTGQHPGGIVVLPVGEEINTFTPVQHPANDMTTATV
TTHFDYHSIDHNLLKLDILGHDDPTMIRMLQDLTGIDPTTIPLDDESVMSLFKNTSALGV
TPDDIHGIPLGCLGIPEFGTDFAMQMVIDAKPQEFSDLIRISGLSHGTDVWLGNAQTLIE
QGLATISTAICTRDDIMIYLIQKGLDSEQSFTIMESVRKGKGLKEEWKTEMRAHDVPEWY
IDSCLKIKYMFPKAHAAAYVMMAWRIAYCKVYYPLAYYAAYFSIRATGFNYEIMCQGKER
LEYFYKDYTRRKDSLSKKEQDTYRDMKIVQEMYARGFDFTPIDVYRAKPDRFQVIDGKLM
PALNTIDGMGDNAAIAVAEAAKDGKFLSKDDFRQRTKATKTVIDLMADLGLLGELPESNQ
LSLFDFA
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacggttttttgatgtatttccatcactgcaggtagaaggcgacatgaaaaat
ctgctgacggagacggaagtaacgaaggtgggcatgaatcatgagcgcgatcatctgcgc
gtctatttaagcagcacgcgtctgattcacaaaaaagatatccgccagttggaatctgcc
attgcacaacagatttttaagggcaggatgatgcaggtcaaggtcattgaaaagtatcat
ctctcggaacagtatacgccggaaaagctgcttgatctgtatcgcgacagcattttagaa
gaactgaaagattacagcctgatggaatacaatcttcttcggacggcgaagatggagttt
acgagcgaaagccacatgctgctcacgctggagaatacgattatcgcacagacgcgttcc
catgagatcgtggagtttttagagaaggtgatctgtgagcgctgcggactcgatctggcg
gtggagcttgcctacgaggaaccgaaggaaagcaaatataagaaaaacagtgatctgcag
attcagtttgagattaaaaacatcatgaaaaaggtacatatccgcaatggcgacggggag
agtgtgccggcggtcgcagaaggcggtgccgaggcggtttccgatggcacaacaacatct
ggtggtacaggcggcaatgccaccacaaataccgtttcttctgcaaaaaatgctgcaaaa
cctgcggaacatgcaggaaaaactgcaggaaatggcgaaaaagggaagaaggaattcaag
cgcagattcgagggcggcggccttaagaagtcggacaatccggatgtgatctacgggcgt
gattttgaggatgaaccgatcgcgatcgagaagattgtgggagagatgggagaggtgacg
atccgctgccaggtcatgacgttagagaccagggagatccggaatgagaagacgatcgtg
attatgtccgtgacggattttaccgattcgattgtgttaaaaatctttaccagaaacgat
cagctgcaggaactgcttgacggaggactcgcaaagggagcgtttttaaagatcaagggt
gtgacgacgatcgacaagttcgacagtgagcttacgatcggttctgtggtcggcatcaaa
aagattgcggattttacgtccacacgtgcagacaccagcccggagaagcgcgtggagttg
cactgccatacgaagatgagcgatatggatggcgtctcggatgtcaaggatattgtaaaa
cgcgccatgaagtggggacacaaggcgatcgccatcacggaccacggcgatgtacaggct
ttccctgacgcgaaccatgcggttccgccggattcggattttaagatcatctacggcgtg
gaggcgtatctggtggatgatctgaaggatattatcgttgactcaaaaggacagagctta
aatgacagctatgtcgtatttgacctggagacaaccggactttcgccggataagaataag
atcattgagatcggtgccgtcaaggtggtggacggagctatcacggagcgtttttcgacc
ttcgtcaatccggaggtgccgatcccgtataatattgagcagctgacgtccatcaaggat
gacatggtgctcgatgcgcccaggattgaggagatcctgcccgaattcatgaagttctgc
gaggggaccgtcatggtggcacacaatgcggagttcgataccggattcatccgcaagaac
tgcgagcgcatgggactgccgtttgattttaccatcgcagataccgtggcgctggcgaga
atcctgctgccgcagttaaaccgtttcaagctggataccgtggcaaaggcggtcggtgta
tcgctggatcaccatcaccgggcggtcgatgacgcggcatgtacggcggagatttttgtc
aagtttatcgagatgcttcatgaacgcggcatggagacgttagacgatgtgaaccagatg
ggcgcgacgtcgccggaacttgtgaaaaagttaaagagccatcacgcgatcatactggcg
acaaacgatatcggacgcatcaatctctaccgtctggtctccatgtcacacctgacctat
tttcacaagacaccgcgtgtgccaaagagcgaatttgtaaagtacagagagggactgctg
ctcggatctgcctgtgaggcaggcgaactctaccgtgcgattttagacggcagaccggag
gaggagatcatccgtcttgtgaagttttacgactatctggagattcagccgatcggcaac
aacagtttcatgctgcgggatgagaagagcgccatcaactctgtcgaggagctgcaggat
atcaaccggcggattgtaaagctgggcgagacattcaacaagctggtggtcgccacctgc
gacgtgcatttccttgatccggaggatgaggtataccgccgtatcatcatggcgggcaag
ggatttaaggatgccgatgaccaggcaccgctgttccttcggacaacggaggagatgtta
aaggagttcgagtatctcggaagcaccaaggcggaggaggttgtcatcacgaatcccggc
aagattgccgatatgtgtgagaagatcgcaccggtgcgcccggacaagtgcccgccggtc
attgagaattccgatcagatgctgcgtgacatctgctacaccaaggcgcacagcatgtac
ggcgaggagcttccgtccatcgtgaaggagcgattggaccgtgagctgaattccatcatt
tccaacggctatgccgtaatgtatatcattgcacagaaactggtgtggaagtccaacgag
gacggttatctggtaggctccagaggttcggtcggatcttcgttcgcggcgaccatgtcc
ggtatcacggaggtcaatccgctgcaggcacattaccgctgtgcctactgcaagtacagc
gactttgattcgccggaggtcaaggcgttctccgggcgaagcggatgtgatatgccggat
aagatctgtccggtctgtggcaagaagctggtaaaagacgggtttgacattccgtttgag
acgttcctgggattcaagggaaacaaggagccggatatcgacctgaacttttccggtgaa
tatcagagtaaagcgcatgcctactgtgaggttattttcggatacggtcagacattccgt
gccggaacgatcggtacgctggcggacaagacggcgttcggatacatcaagaattactac
gaggagcgcggtgtccacaagcggaactgtgagattgaccgtattgtgcagggatgcgtc
ggcgtccgcaggacgacgggacagcacccgggcggaatcgtcgtgcttccggtgggagag
gagatcaacacgtttacgccggtacagcatccggcgaacgatatgacgacagcgacggta
acgacacattttgattatcactcgatcgaccacaacctgttaaaactcgatattctcgga
cacgatgatccgacgatgattcgtatgctgcaggatctgacgggaattgacccgacaacg
atcccactcgacgatgagtcggtcatgtccttatttaaaaatacatcggcactcggtgtg
acgccggatgacattcatggaattccgctcggatgtctcggtattccggagtttggaacc
gatttcgccatgcagatggttattgatgccaagccgcaggagttctcggatctgatccgt
atctccggtctgtcccacggtacggacgtatggctcggcaatgcgcagacactcatcgag
cagggactggcaacgatttccaccgcgatctgtacccgtgacgatatcatgatctacctg
atccagaagggacttgacagtgagcagtccttcacgatcatggagtcggtgcgtaaggga
aaaggcttaaaggaagagtggaagacggagatgcgtgcgcatgatgtgccggagtggtac
atagattcgtgtctgaagatcaagtacatgttcccgaaggcacatgcggcggcatacgtt
atgatggcatggcgtattgcctactgtaaggtatattatcctcttgcttactatgcggca
tatttctcgatccgtgcgacgggatttaactacgagatcatgtgtcagggcaaggagcgt
cttgaatatttttacaaggattacacgcggagaaaagattcgctctccaaaaaggagcag
gatacttaccgcgatatgaagatcgtgcaggagatgtatgccagagggtttgattttacg
ccgatcgacgtgtaccgcgcaaagccggatcgttttcaggtgattgacggcaaactcatg
ccggcgttaaacacgatcgacggtatgggtgacaatgctgcgattgcggttgccgaggcg
gcgaaggatggcaagtttctgtccaaggacgacttcaggcagcgcaccaaggcgaccaag
acggtcatcgatcttatggcagatctgggactgctcggcgaactgccggagtcgaaccag
ctgtcgctgtttgattttgcataa
DBGET
integrated database retrieval system
