Roseburia hominis: RHOM_10905
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Entry
RHOM_10905 CDS
T01621
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rho
Roseburia hominis
Pathway
rho03420
Nucleotide excision repair
rho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHOM_10905
03430 Mismatch repair
RHOM_10905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_10905
Enzymes [BR:
rho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHOM_10905
DNA repair and recombination proteins [BR:
rho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHOM_10905
MMR (mismatch excision repair)
Other MMR factors
RHOM_10905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
Activator-TraM
Vp24_capsid
Motif
Other DBs
NCBI-ProteinID:
AEN97290
UniProt:
G2T403
LinkDB
All DBs
Position
complement(2359472..2361712)
Genome browser
AA seq
746 aa
AA seq
DB search
MSIYDTLNEQQKLGVITTEGPVLILAGAGSGKTRVLTHRTAYLIEEKGVNPYNIMAITFT
NKAAGEMRERIDALVGYGSESIWVSTFHSTCVRILRRHIDRIGYDTNFTIYDSDDSKSVM
KEICKRLNIDTKIYKERSLLAAISSAKDELVSPTQFALQAAASSDFAKKKQAQVYQEYQA
ALQKNNALDFDDLIVKTVELLQTDPEVLAYYQERFRYIMVDEYQDTNTAQFELIRLLAGK
YKNLCVVGDDDQSIYKFRGANIYNILNFEKHFPDAVTIKLEQNYRSTQNILNAANSVIAN
NVGRKAKTLWTANGEGEKIDFEQFDTAYEEADYVARDIASGVREGKYGYGDYAVLYRTNA
QSRLFEERFIVSNIPYKIVGGVNFYARKEVKDLLAYLKTIDNARDDLAVRRIINVPKRGI
GATTLNRVSDYAEAYDISFYESLKRAEEIPSLGKSAAKIKPFVTFIQTMRSKLPYIGVAD
LLREVIEETGYVKELEAEGTDEAEARIENIDELLSKVVAYEEGEEQPTLSGFLEEVALVA
DIDSVGEENDYVVLMTLHSAKGLEFPKVFLAGMEDGLFPSYMSITSDNASSELEEERRLA
YVGITRAMKELVITSARQRMVRGETQYNKVSRFVKEIPPELLNGEIKKPAYLENRERRTA
EPVRKKRPTMRDQLSGQSMQARAFSSVHTEGGSLSYGVGDRVSHMKFGEGTVKAIVPGGR
DFEVTVDFDAAGTKKMFAAFAKLKKV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttatgatacattaaacgagcagcagaagctcggcgttataaccaccgaagga
ccggtgctgattctcgcgggagcgggttccggcaagacgagagtgctgacacaccggacg
gcatatctgatcgaggaaaagggcgtcaatccatacaatattatggcgatcacgttcacc
aacaaggcggctggcgagatgagggagcgaatcgatgcgctggtcggatacggctcggag
agcatctgggtgtcgacgtttcactctacctgcgtgcgcatcttaaggagacacattgac
cgcatcggatacgacacgaattttacgatctatgattcggatgattccaagagcgtcatg
aaggagatctgcaagcgcctgaatatcgataccaagatctacaaggagcgcagccttctg
gcggcgatctcctctgcaaaggacgagcttgtaagtccgacgcagtttgccctgcaggcg
gcggcatcgagtgattttgcgaagaaaaagcaggcgcaggtctatcaggagtatcaggcg
gcgctgcagaagaacaatgcactggattttgacgacctcattgtaaagacggtggagctg
ctgcagacggatccggaggtgcttgcctactatcaggagcgtttccgctatatcatggtg
gacgagtatcaggatacgaacacggcgcagtttgaactgatccgtcttctcgcgggcaaa
tacaaaaatctgtgcgtggtcggtgatgacgatcagtcgatctacaagttccgcggagcg
aatatctacaatattttaaactttgaaaagcattttccggatgcggtcaccatcaagctg
gaacagaattaccgttcgacgcagaacatcctaaacgcggcgaacagtgtgattgcgaac
aatgtcggaaggaaagcgaagacgctctggacggcaaacggcgaaggagagaagatcgac
tttgagcagtttgacactgcctacgaggaggcggattatgtcgcaagggatattgcgtcc
ggtgtccgggaaggaaagtacggttacggcgactatgcggtgctttaccgcacgaatgcg
cagtcccgtctgtttgaggagcgttttatcgtgtccaatatcccgtacaagattgtcggc
ggtgtgaatttctatgcgcgcaaggaggtcaaggatctgctggcgtacttaaagacgatc
gacaatgcgagggacgatctggcggtgcgaagaatcatcaatgtaccgaagcgcggaatt
ggtgcgacgacgctaaatcgtgtatccgattatgcggaggcgtacgacatcagtttttac
gagtccttaaagcgtgcggaggagataccgtcccttggcaagagtgcagcgaaaatcaag
ccgtttgtgacgtttattcagacgatgcgcagcaagctgccgtatatcggtgtggcggat
ctgctcagagaggtgatcgaggagacgggctacgtgaaggagcttgaagcggaaggcacc
gacgaggcggaggcgcggatcgagaatatcgatgagttgttaagtaaggtggtcgcctac
gaggagggcgaagaacagccgacattaagcggtttcttagaggaggttgcactcgtggcg
gatattgacagcgtcggcgaggagaacgattatgtggttctcatgacactgcacagcgcc
aaaggtctggagttcccgaaggtctttctggcgggaatggaggacggtttgttcccgagc
tatatgtcgatcacgtcagacaatgccagcagtgagctggaggaagaacgcaggctggcc
tatgtcggcattacacgagcgatgaaggagcttgtcatcacgtcggcgagacagcgtatg
gtgcgcggcgagacacagtacaacaaggtctcacgctttgtgaaggagattccgccggag
cttttaaacggcgagatcaaaaagccggcatatctggaaaacagggagcggcgcacggcg
gagccggtacggaagaagcggccgacgatgcgggatcagctgtccggtcagagcatgcag
gcgagagcgttttcatcggtacatacggaaggcggaagcctaagctacggtgtgggcgac
cgtgtgtcccacatgaagttcggagagggaacggtaaaagccatcgtgcccggcggcaga
gattttgaggtgacggtcgattttgacgcggcgggaaccaagaaaatgtttgcagcgttt
gcaaaattaaaaaaagtataa
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