Roseburia hominis: RHOM_11715
Help
Entry
RHOM_11715 CDS
T01621
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rho
Roseburia hominis
Pathway
rho00260
Glycine, serine and threonine metabolism
rho00460
Cyanoamino acid metabolism
rho00630
Glyoxylate and dicarboxylate metabolism
rho00670
One carbon pool by folate
rho00680
Methane metabolism
rho01100
Metabolic pathways
rho01110
Biosynthesis of secondary metabolites
rho01120
Microbial metabolism in diverse environments
rho01200
Carbon metabolism
rho01230
Biosynthesis of amino acids
rho01240
Biosynthesis of cofactors
rho04981
Folate transport and metabolism
Module
rho_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHOM_11715 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RHOM_11715 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RHOM_11715 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RHOM_11715 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RHOM_11715 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RHOM_11715 (glyA)
Enzymes [BR:
rho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RHOM_11715 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEN97451
UniProt:
G2T406
LinkDB
All DBs
Position
complement(2550368..2551597)
Genome browser
AA seq
409 aa
AA seq
DB search
MEDIEAVDMEIAQAIKDEFDRQNSHIELIASENWVSPAVMSAMGSVLTNKYAEGYPGKRY
YGGCDCVDVVEELARERAKKLFGCDYVNVQPHSGAQANMAVQFAILKPGDTVMGMNLDHG
GHLTHGSPVNFSGTYFHIVPYGVNDEGFIDYDKVMEIALECKPKMIIAGASAYARTIDFK
KFREIADACGAVLMVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTLRGPRGGMILCNQE
VADKYNFNKAIFPGIQGGPLMHVIAAKAVCFKEALQPEFKVYQQNIIDNAQALCKGLMNR
GIKIVSGGTDNHLMLVDLTNFDQTGKAVEKLLDSVNITCNKNTIPNDPKSPFVTSGVRLG
TPAVTSRGFNTGDMDQIAEAIAMMIKEGEPAADRARAIVAELTAKYPLK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatcgaagcggtagatatggaaatcgcacaggcaataaaggatgagtttgac
agacagaacagtcatatcgagctgatcgcatcggagaactgggtaagcccggcggtgatg
tctgcgatgggaagcgttttgactaataaatatgcggaaggctatccggggaagcgctat
tacggcggatgcgactgtgtggatgtcgtggaggagctggcaagagagcgcgcgaagaag
ctgttcggctgtgactatgtcaacgtgcagccacattccggagcacaggcgaatatggca
gtgcagttcgcgattttaaagccgggcgacaccgtgatggggatgaatctggatcacggc
ggacatcttacgcacggttcaccggtcaatttttccggaacctattttcatatcgtaccg
tacggtgtgaacgacgagggattcatcgattacgacaaggtgatggagattgccctcgag
tgcaagccgaagatgattattgcaggtgccagtgcctacgcgcgcacgatcgactttaag
aaattccgtgagatcgcggacgcctgcggtgccgtgctcatggttgacatggcgcacatc
gccggtctggttgcggcgggacttcatccaagcccgatcccgtatgcggatgtcgtgaca
acgaccacgcacaagactctgcgcggaccgcgcggcggaatgattctctgcaaccaggaa
gtggcagacaagtacaactttaataaggcaatcttcccgggaatccagggaggtccgctg
atgcatgtgatcgcggcgaaggcagtctgcttcaaggaagcactgcagccggagttcaag
gtgtaccagcagaacatcatcgacaatgcgcaggcgctgtgcaaaggactgatgaaccgc
ggtatcaagatcgtatcgggaggcaccgacaatcacctgatgcttgtcgacctgacgaat
tttgaccagaccggaaaagcggtggagaagcttctggattccgtaaatatcacctgcaat
aaaaatacgattccgaacgatccgaagtctccgttcgtgacgagtggtgtgcgtctcggt
acgccggcggtgacatcccgcggattcaataccggggatatggatcagattgcggaggcg
attgccatgatgatcaaggagggagagccggcggcagatcgcgccagagcgattgtggcg
gagctcaccgcaaaatatccgttaaaataa
DBGET
integrated database retrieval system