Roseburia hominis: RHOM_11875
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Entry
RHOM_11875 CDS
T01621
Name
(GenBank) A/G-specific DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rho
Roseburia hominis
Pathway
rho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHOM_11875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_11875
Enzymes [BR:
rho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
RHOM_11875
DNA repair and recombination proteins [BR:
rho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHOM_11875
Prokaryotic type
RHOM_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AEN97483
UniProt:
G2T438
LinkDB
All DBs
Position
complement(2586238..2587404)
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AA seq
388 aa
AA seq
DB search
MLDNYHLNQLAEPLLAWFVDHARVLPWRERPEPYRVWVSEIMLQQTRVEAVKPYYERFLK
ALPDVAALAACPEDQLMKLWEGLGYYNRVRNMQKAAVTVTEEYDGVLPADYGKLLELKGI
GSYTAGAIASIAYGIPVPAVDGNVLRILTRVAADDTDIMKQSFRSAVEAQLGEMMRELTV
PEELRRVLRDENVPGALNQAMMELGATVCVPNGAPLCEECPWSKMCLARAQGRMMDFPVK
SKAKARRIEERTVLVIRDGEKVAIRKRPKKGLLAGLYELPNLSGALSAKEVLSYVKEQQF
APLRIEKLADAKHIFSHIEWRMSGYAILVEEAGFAAEKEPESGNGRTPEEKADGEGGLIF
VDAWDARERYAIPSAFSAYAGYLKKEFD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctggataattatcatctgaaccagttggcagagcctctgcttgcgtggtttgtagat
cacgcgcgggtgctcccgtggcgtgagagaccggagccttaccgcgtgtgggtctcggaa
atcatgctgcagcagaccagagtggaggcagtaaagccgtattatgagcgctttttaaaa
gcattgccggatgtggcggcgcttgcagcctgtccggaggatcaattgatgaagctctgg
gaggggcttggttattacaaccgcgtgagaaatatgcagaaagccgcagtcaccgtgacg
gaggagtatgatggagtgcttccggcggattatgggaagcttctggaattgaaagggatc
ggttcctacacagcgggtgccatcgcatcgatcgcctatgggataccggtgcctgcggta
gacggaaatgtgctgcggatcttgacgcgtgtggcggcggacgataccgacatcatgaaa
cagtcgttccgcagtgcggtggaagcgcagctgggagagatgatgcgggaacttacggtt
cctgaggagcttcggcgtgtccttcgcgatgaaaatgttcccggcgcgctcaaccaggcg
atgatggagcttggggcgacagtctgtgtgccgaacggcgcacctctctgtgaggaatgt
ccgtggagtaagatgtgtcttgcgagagcacaggggcgcatgatggattttccggtaaaa
agcaaggcgaaggcacggcggattgaggagcgcacggtgcttgtcattcgggatggagaa
aaggtggcaatccgcaagcgcccgaagaaggggctgctcgccgggctgtatgaactgccg
aatctgtccggcgcattgagcgccaaggaagttctttcctatgtaaaagaacagcagttt
gctccgctgcgaatcgagaagcttgcggatgcaaagcacatattttcccatatcgagtgg
aggatgagtggatatgccattctggtggaggaagccggctttgccgcagaaaaggaacca
gagtcaggaaatgggcgcaccccggaagagaaagcggacggggaaggcggactgattttt
gtggatgcatgggatgcgagagagcgttatgccattccgtcggcattttcagcatatgcg
ggttatttaaaaaaggaatttgattaa
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