Roseburia hominis: RHOM_14460
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Entry
RHOM_14460 CDS
T01621
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rho
Roseburia hominis
Pathway
rho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHOM_14460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rho03021
]
RHOM_14460
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_14460
Enzymes [BR:
rho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHOM_14460
Transcription machinery [BR:
rho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHOM_14460
DNA repair and recombination proteins [BR:
rho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHOM_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF4332
PASTA
RAD51D_N
MukB
Motif
Other DBs
NCBI-ProteinID:
AEN97998
UniProt:
G2T4N1
LinkDB
All DBs
Position
complement(3126502..3127461)
Genome browser
AA seq
319 aa
AA seq
DB search
MFDFQKPKIEIAEISEDKKYGRFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNIKNLAIRNNSSTNEPKVAYIEFEGEGVVTAADIQVDSDI
QILNPDLVIANLNGGADCKLYMELTITKGRGYVSAEKNKTEDTPIGVIAVDSIYTPVERV
NLSIENTRVGQITDYDKLTLDVYTNGTLEPDEAVSLAAKVLSEHLSLFIDLSEAAQQADV
MIEKEDNAKEKVLEMNIDELELSVRSYNCLKRAGINTVEELTNRTPEDMMKVRNLGRKSL
EEVLAKLKELGLQLNQGEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattttcaaaaaccaaaaattgagatcgcagaaatttcagaagacaagaagtac
ggaaggtttgttgtagagccactggaaagaggctacggtacaacacttggtaattcttta
agaagaatcatgctttcttcattaccgggtgcggctgtaagccaggtcaagattgatggt
gtgctgcatgagttcagttcgattcctggcgtaaaggaagacgtaactgagatcatcatg
aacatcaagaatcttgcaatccgtaataacagttctacgaatgagccgaaagttgcatac
attgaatttgaaggcgaaggcgtagtcacagcagcggatatccaggtggattctgatatt
cagattttaaatccggatctggtaattgccaatttaaatggcggagcagattgtaagtta
tacatggaactcaccattacaaagggcagaggctatgtcagtgcagagaagaataagacc
gaggatacaccgatcggtgtgatcgctgtcgattctatctatacaccggtagagcgtgtc
aacctttctatcgagaatacgcgtgttggtcagattaccgattacgataagctgacactg
gacgtatacacgaacggtaccttggaaccggatgaggctgtcagccttgcggcaaaggta
ttgagcgagcatttaagcctgttcatcgatctgtctgaggctgcacagcaggcagacgtt
atgatcgagaaagaggataatgcgaaggagaaggttcttgagatgaacatcgatgaactg
gaactttccgttcgttcttataactgtctgaagagagccggaatcaataccgttgaggaa
ttgacaaaccgcacaccggaggacatgatgaaagttcgtaacctgggacgtaagtccttg
gaggaagttcttgcaaagttaaaagagctcgggcttcagctgaatcagggagaagaataa
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