Roseburia hominis: RHOM_15125
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Entry
RHOM_15125 CDS
T01621
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rho
Roseburia hominis
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RHOM_15125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rho03019
]
RHOM_15125
03009 Ribosome biogenesis [BR:
rho03009
]
RHOM_15125
03036 Chromosome and associated proteins [BR:
rho03036
]
RHOM_15125
Enzymes [BR:
rho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RHOM_15125
Messenger RNA biogenesis [BR:
rho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RHOM_15125
Ribosome biogenesis [BR:
rho03009
]
Eukaryotic type
90S particles
RNase
RHOM_15125
Prokaryotic type
rRNA processing factors
RHOM_15125
Chromosome and associated proteins [BR:
rho03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RHOM_15125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
Cep57_MT_bd
Motif
Other DBs
NCBI-ProteinID:
AEN98131
UniProt:
G2SYN4
LinkDB
All DBs
Position
complement(3238140..3239213)
Genome browser
AA seq
357 aa
AA seq
DB search
MDEKEIKFIQDQIGYTFKNQELLVQAFTRRSYSMENGGQDNEVLEFIGDKALDFVVVKQL
SEEFGHYSKKYQNWEKWGKTEETGTFISDLDEGELTEIKKQLVQKNTLADAIDNLGIAYY
LIMGKGDVEKNIQDSLSVKEDLFEAILGAIALDSNWDIEALQDSMNVMLNPGELMFDEDV
NYVAEIQAWSSANSGNIPLHCFYPTSMQGTWYMPRHHMCIYGKAEQDTHFACEVLIPGID
YHFVGYGRSKNLARMDASRLAYEYLKDEDMLFSIRDEIDDPNYNDSIGQLEILARRGYFS
IPQYDFKETHDEDGNPVWNCKCSIKEKDTVTNGRSSSKKDAKKQAAYDMLTFVLEEE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaaagaaatcaaatttatccaagatcaaattggatacacgttcaaaaaccag
gagctgcttgttcaagcatttactcgtcgctcctattcaatggaaaatggaggacaggat
aatgaggtccttgaatttatcggagacaaggcattggattttgttgtcgtgaagcagctc
tccgaggaattcggccattattcaaagaagtatcagaactgggaaaagtggggtaagacc
gaggaaacgggaacctttatttctgatttggatgagggagaattaactgagattaagaag
caattggttcaaaagaacactcttgcagatgcaatcgacaacttagggatagcctactat
ctgataatgggaaaaggagatgtcgagaaaaacattcaggattcactatcggttaaagag
gatctgtttgaagcgattcttggtgcgatagccttggattcaaattgggatattgaagca
ttacaggatagcatgaatgttatgctgaatccaggcgagctcatgtttgatgaagatgta
aactatgtggctgagatacaagcttggtcatcggctaattcaggaaacattccacttcac
tgtttctatcctacttccatgcagggtacatggtatatgccaaggcatcatatgtgtata
tatggaaaagcggagcaggatacgcactttgcgtgtgaagttctaataccgggaattgat
tatcatttcgtcggatacggcagatcaaagaatctggccaggatggacgcatcgagattg
gcgtatgaatatctgaaagatgaggatatgctcttttctattagagatgagattgatgat
ccgaattataatgattccatcgggcagttggagatccttgccagaagaggctatttctcc
atccctcaatatgacttcaaagaaacgcatgacgaagatggtaatccggtttggaattgt
aaatgctctataaaagaaaaagatactgtaaccaatggaagatcttcgtctaagaaagat
gcgaagaaacaggcagcatatgatatgctgacatttgttttggaggaggaataa
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