Roseburia hominis: RHOM_16905
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Entry
RHOM_16905 CDS
T01621
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rho
Roseburia hominis
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rho03016
]
RHOM_16905
Transfer RNA biogenesis [BR:
rho03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RHOM_16905
Prokaryotic type
Methyltransferases
RHOM_16905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
Arf
Ras
Gtr1_RagA
Roc
ABC_tran
cobW
MMR_HSR1_Xtn
PCDH15_12th
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEN98485
UniProt:
G2T619
LinkDB
All DBs
Position
complement(3587405..3588784)
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AA seq
459 aa
AA seq
DB search
MKTDTIAAIATAMAGSGIGIVRISGEEAVSITDQIFHMPGGKKLSDMETHTIHYGHIRDG
EEVIDEVMVLLMRGPRSYTREDTVEIDCHGGVYVMKRILETVIKYGARPAEPGEFTKRAF
LNGRIDLSQAESVMDVISAKNEFALKSSMKQLSGAVSDAVKEIRGEILHEIAFIESALDD
PEHISLDGYGERLELTIEGAVDRIEKLLASSDNGRILKEGISTVIVGKPNAGKSSLLNTL
LGEERAIVTEIAGTTRDVLEEQINLNGIVLNIIDTAGIRDTDDIVEKIGVDKARKYVKDA
DLILYVVDASTNLDENDGEIMELLHGRRTIILLNKSDLTPLTTAEDIRAHVDKDCPVISI
SAREQKGIDVFTEQIREMFFRGEVTFNDEVYITNIRHKTALQEALSSLHLVEQSIADGMP
EDFYSIDLMNAYEVLGTIIGEAVEDDLVNEIFSKFCLGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatactattgctgcgattgcgactgccatggcaggatcgggaatcggaatt
gtcagaatcagcggggaagaagcggtttccattacagatcagatttttcatatgccgggc
ggtaagaagctttcggatatggagacacacacgattcattacggacatatccgggatgga
gaggaagtcattgatgaggtgatggttttactgatgcgcggaccgcggagttacaccagg
gaagatacggttgagattgactgccacggcggtgtttatgtgatgaagcgcattttggag
acagtcatcaaatatggggcgcgtcctgcagagccgggagaattcacgaagcgtgcattt
ttgaacggacgtattgatttgtcccaggcggaatctgtgatggatgtgatttcggcgaag
aatgaatttgccttaaagagttccatgaaacagttatccggcgctgtctcagatgcagtc
aaagagattcggggagagattctccacgagatagcatttattgaatcggcgcttgatgat
ccggagcatatcagcctggatggttacggggagagactggagcttaccatagagggtgca
gtggacagaattgagaagctgttggcttccagtgataacggccgcatcttaaaagaggga
atttctaccgtcattgtgggaaaaccaaatgccggaaaatcgtcacttcttaacactcta
ttgggcgaggagcgggcaatcgttacagaaattgccggtactacaagggatgtgcttgaa
gagcagattaacctgaatggaattgtgctcaatatcatagacactgcagggattcgtgat
acggatgacattgtggaaaaaatcggagtcgacaaggcgcggaagtatgtgaaggatgca
gatctgattctgtatgtagtagatgcctccacgaatctggatgagaacgacggggagatc
atggagctgcttcacggaagacgcacgatcatacttttgaacaaatcggacttaacgccg
ttgacaacagcggaggatattcgtgcacatgtggataaagactgtccggttatttctatt
tcggcgagagagcagaagggaatcgatgtctttaccgagcagatccgggaaatgtttttc
cggggagaagttacctttaatgatgaagtctatattacgaatattcgtcataaaaccgct
ttacaggaggcactttctagtttacatttagtagagcagagtatcgcggatggaatgccg
gaggacttttactcgattgatctgatgaacgcgtatgaggtgctgggaactatcatcggg
gaagcggtggaagatgatctggtcaatgagatattcagtaagttttgtctgggaaaatag
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